Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00080 ATGTCTTGGGCAGGCCCTGAGGATATTTACCTTTCTACTTCACTTGCCAGCTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTCATGGGGACACTTCGCTCTTTTGATCAATTTGCCAATGCAGTTCTTGAGGGTGCTTGTGAGAGAGTTATTGTTGGTGATCTGTATTGTGACATCCCTTTAGGTCTCTATGTGATCCGTGGGGAAAATGTTGTTCTAATTGGTGAGCTGGACTTGGAGAGGGAGGAACTTCCCGAACATATGACACGTGTTTCTACCGCAGAAATCAAGAGGGCACAGAAAGCAGAAAGGGAGGCTTCAGATCTGAAAGGGACTATGAGGAAAAGAATGGAATTCCTTGACTTTGACTAG 387 0.4444 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00080 128 CDD LSm1 12 82 IPR034104 GO:0000956
Gma16g00080 128 PANTHER LSM1 1 127 IPR044642 -
Gma16g00080 128 SMART Sm3 13 81 IPR001163 -
Gma16g00080 128 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1 1 127 - -
Gma16g00080 128 Gene3D - 12 126 - -
Gma16g00080 128 SUPERFAMILY Sm-like ribonucleoproteins 13 83 IPR010920 -
Gma16g00080 128 Pfam LSM domain 14 80 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00080 Gma-Chr16 858413 862523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00080 K12620 - gmx:100306352 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00384 07 3465275 3468262 Gma16g00080 16 858413 862523 GST