Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00066 ATGGTTCTCATTCTTTTCTTTCTCGCTCTTATTTCATCCACATCTCATGCTTCTAATTTTAATGATTTCTGCGTAGCAGACCTCAAGGCTCCAGAGAGCCCTTCTGGCTATCCTTGTTTACCACCTAATACTTTGACGGCAGATAACTTTGTGTTCACTCTTCAACTTCCAAACACCACAAACCCTTTACTCAAAGCAGGAATTAACACTGCATTTGTCAATGACTTTCCTGCTCTCAATGGCCTTGGCGTCTCTGCAGCACGTGTAGTTATTGAAAAAGATGGATTTTTTCCACTGCACACACATTCAGATGCCACTGAACTAATAATCACAGTAGAAGGTGAAATCACTGCTGGATTCGTGACACCTACGAAAGCTTATGTGAAGACGCTGAAATCCGGAGATCTTATGGTTATCCCAAAGGGACTATTGCATTTTGTTGTGAATTCTTGTAAGGGGAAATCTACTGGTTTTGCAGTTTTTAGTAGCTCAAACCCTGATGTCCAATTATTTAATGATATATTTGCCAACAATGTACCTTCTCACATACTTGCACAAACTACCTTCCTTGATGTTGCCCAAGTCAAGAAGCTTAAGGCTCGTTTCGGTGGCAGCGGCTAG 621 0.4138 MVLILFFLALISSTSHASNFNDFCVADLKAPESPSGYPCLPPNTLTADNFVFTLQLPNTTNPLLKAGINTAFVNDFPALNGLGVSAARVVIEKDGFFPLHTHSDATELIITVEGEITAGFVTPTKAYVKTLKSGDLMVIPKGLLHFVVNSCKGKSTGFAVFSSSNPDVQLFNDIFANNVPSHILAQTTFLDVAQVKKLKARFGGSG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00066 206 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Gma16g00066 206 PRINTS Germin signature 129 149 IPR001929 GO:0030145
Gma16g00066 206 SMART Cupin_1_3 52 196 IPR006045 -
Gma16g00066 206 Gene3D Jelly Rolls 15 206 IPR014710 -
Gma16g00066 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 4 202 - -
Gma16g00066 206 CDD cupin_OxOx 16 202 - -
Gma16g00066 206 SUPERFAMILY RmlC-like cupins 19 203 IPR011051 -
Gma16g00066 206 Pfam Cupin 68 196 IPR006045 -
Gma16g00066 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 4 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00066 Gma-Chr16 663492 664112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00066 1 205 Miscellaneous Gene Families AT5G20630 46.154 3.62e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00066 - - gsj:114391045 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00367 07 3285074 3285694 Gma16g00066 16 663492 664112 GST