Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00044 ATGTCTTTGCTTCGACGGAGAAAAGGGTCGGAACCGGGAAAGGGTCCGAGCCATAGTTCGGAACCGAAGGTTCTAAGCGAAGAGGAGACAGAAGATGATAAGAATAAGAAAAATAAGAAGAAGAAGAACAACAAATGGTCGTGCTTCGATAGCTGTTGTTGGGGGGTGGGGTGCATTTGCACTTTGTGGTGGTTTCTTCTGTTTCTGTATCAGATGATGCCTTCTTCGATTCCCCAGTATGTGACTGAGGCCTTCACTGGGCCCATGCCGGACCCACCGGGCCTCAAGCTCAAGAAGGAAGGGCTCAAGGTGAAGCACCCTGTGGTTTTTGTGCCAGGGATTGTCACTGGTGGGCTTGAACTGTGGGAGGGTCACCAGTGTGCTGAAGGGTTGTTCAGGAAACGCTTGTGGGGTGGTACTTTTGGAGAAGTCTATAAAAGACCTTCATGCTGGGTGGATCACATGTCACTGGACAATGAAACAGGATTGGATCCACCAGGCATAAGAGTTAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTCGTTTGGGCAGTCCTAATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAAACTATGTACATGGCTGCATATGATTGGAGAATAGCATTTCAGAACACTGAGGTGAGGGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGAAATAAGGCAGTTATTATTCCACATTCAATGGGGGTCTTGTACTTCCTACATTTTATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGGGGAGGACCAGATTGGTGCTCCAAATATATAAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCCAAGGCTATAGCAGGGCTATTCTCAGCTGAGGCCAGGGATATTGCTGTTGCCAGGACGATAGCTCCAGGATTTTTAGATAACGATCTGTTTCGCATTCAAACCTTGCAACATGTAATGAAGATGACCCGTACTTGGGACTCAACAATGTCAATGATACCAAGAGGAGGAGATACTATATGGGGTGGTCTTGATTGGTCACCAGAAGAAGGCTATCACCCTAGCCAGAGGAAGCATAGCAGTGACTATACTCAGTTAACAGACCAAGAGACAAATCAAACAAATGTTGTCAACTATGGAAGAATGATATCATTTGGCAGAGATGTGGCCGAGGCACACTCCTCTAAGATTGAGATGGCTGACTTTCGGGGTGCCATCAAGGGTCGCAGTGTTGCAAATACCACCTGTCGTGATGTGTGGACTGAATACCATGAAATGGGATTTGAGGGAGTGAGAGCAGTTGCTGAACATAAAGTTTACACAGCTGGCTCTATCGTAGAACTCCTTCAATTTGTTGCTCCAAAGATGATGGCTCGTGGTAGTGCTCATTTCTCTTATGAAATTGCTGACAATTTGGATGACCCTAAATATAATCACTACAAGTATTGGTCAAACCCTTTGGAAACAAAACTACCAAATGCTCCTGATATGGAAATCTTCTCTATGTATGGAGTTGGCTTACCAACTGAAAGATCTTATATTTACAAGTTAACTCCCTTTGCCGAGTGTTACATTCCTTTTGAAATTGACACCACGCAAGATGGTGGAAGTGATGAAGATAGTTGTCTGCAAGGTGGAGTCTACACTGTTGATGGGGATGAGACTGTGCCAGTTCTAAGTTCAGGCTTCATGTGTGCTAAAGGCTGGCGCGGAAAAACAAGATTCAACCCGTCTGGTATGCGCACGTACGTTAGAGAATATGATCATTCTCCTCCAGCCAACCTTCTAGAGGGAAGGGGCACACAAAGTGGTGCTCATGTTGACATCATGGGAAACTTTGCATTGATTGAGGATGTTATAAGAGTGGCTGCTGGAGCCAAAGGAGAAGATCTAGGAGTTCCATGGAGGGGTGAACTACGCGAATTGGTTATATTGGAAGAGCTTGCATTGAACATTTTTGTTATTAAAAAGAAGAAGCACTGTGATTCTGATTCTCTCTCCGTCGTTGCAACTGGTGCCTCCGTCGTTTTCATCCCTAACTCCACACCTTCGACGCCCTATTATGATCGCAGGTTTAGAAACGGGGGAATGGGTTTATGTGTTTTGAATGTTGATTTTGCTCGGACTAGATTGAGTTGTAACAAAGTAAAAGGGAAATACGGTTCTTTTGCTGCCTTGAAAGATTTTGGGGATATTGGTTCTGTTGCTTATGAAGATGGGGCAGCAGAATTTGATGTTGCAGATAGGAAGAGGAGAATGAGGGCTGAACAGCAAATTAGTGGGCAAGGGCTGTGGGTGAGGATGAATTTGCAACAAATTGGGCAGCCTAAATCATCTAATGGATATGGTCGTCAGAAATCTGAAAAAGAAGGGGCAACTAAGTCTGATAATAAGCTCCCATCTGTAAAGTCAAATTCTAGCAGCAGATTAGCAGGTACAGGTGTAGTGACTGGCAATAAAGGTGGTGGTTATGGGAGTCCTTCACATGATCGATTAGTATATTTAACAACATGCCTTATTGGGCAGCATGTAGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATTCTGACAAAGATTTTGGAATCATTTTGAAAATGGCTCGCTTGACAAAGGCTGCCTCTTTGCAAGGACAGGGATCTGGTGTAGAATTTGTCAGCGAAGCTCCTTCTAAGACTTTAATTATACCTGCCAACGACCTTGCACAAGTTATAGCAAAGGATGTTGCTGTTTCCAGAGATGGCCTACCTAGTGAATCTCACTATGATATGCATCACGAGATCATGGTTGATTCAGTAATATCTCAATCCTGTCATGTTGAGACAGGGAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCAACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGTGGGGATGGGATCAGTTTGAAACAAATGAAATGTTGTTCGGTGTAAAAAGCACATTCAACGAGGATTTCTATACAACAAAGCTTGAAATAGGGCCCCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACACAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAAAGGTGTTGATGATAGTGGATATGATGAAAATGAGGACAGGCTCTTGGATTCACATAATTCTGAAACTTTTGATAATATTTATGGTTTAGTCAATAAGAGCCCAGGTGAAGCAAGTGGTCGAAAAGGCAGTAATGGAGCTCAAACGTGGTCAAATTTCTCCTCTGTGAATCACTCAGAGTTATCTCAGTCAAGTTCTGGTGTGGATTTATGTCGCTCTGGTTCTAAAGATCATGCTAAGCAGTTAGCATCTGAACTCCCTGCCCTGAGTTGCTCATTTTCAGATGGAGAAAGCAGGATTCAGCTGAACTCAGTTAATAACCTACACGGAGTCAATGATAATACTGTGGAAGAAAATTGGATACAAGCTGAGGATGTTCAACTTTTAAAATCTGAGGATTTACAGTCATCACTTAAGTTGAAGAAAGATGGCTCTGATGAAGGGGGTTTATCTACTAATGTGGCCTTGTGTGCCCCTTCTACTCGTATTTTATCAAAGACTCCTAAAGAAACTGGGTCAGTTGGGGAATCAAAGTCTGTAATTTCACGTGGAAGACTAGGTAGATCATTGGGTTCTGATTATGTGGCAGCAACCTCTGGTCCGGGTCTATCACCAAGTTCTTCAGTTGGTTCGCTGTCTTCGGAAAAATCAACTCTGAATCCCAATGCCAAGGAGTTCAGGCTCAACCCTAATGCAAAGAGTTTTATTCCGTCTCAATCACATGCTAGGCCCCGCTCCCCCATGTCTGATGGTTCCTTCTATTTCCCAGCTACTGTATCCACCATACCAAATATGCCAGCCATGTCCATGGGTATTGGAGTTGGGACTACTTTTGCAGGGCCACAACCAGTCGTATATAATCCACAAGCGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCACAGTATGGACAACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCTGAGATGCCATATAAGGGACGGGATCATTGA 4230 0.4355 MSLLRRRKGSEPGKGPSHSSEPKVLSEEETEDDKNKKNKKKKNNKWSCFDSCCWGVGCICTLWWFLLFLYQMMPSSIPQYVTEAFTGPMPDPPGLKLKKEGLKVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVDHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRIAFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARTIAPGFLDNDLFRIQTLQHVMKMTRTWDSTMSMIPRGGDTIWGGLDWSPEEGYHPSQRKHSSDYTQLTDQETNQTNVVNYGRMISFGRDVAEAHSSKIEMADFRGAIKGRSVANTTCRDVWTEYHEMGFEGVRAVAEHKVYTAGSIVELLQFVAPKMMARGSAHFSYEIADNLDDPKYNHYKYWSNPLETKLPNAPDMEIFSMYGVGLPTERSYIYKLTPFAECYIPFEIDTTQDGGSDEDSCLQGGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGMRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGAKGEDLGVPWRGELRELVILEELALNIFVIKKKKHCDSDSLSVVATGASVVFIPNSTPSTPYYDRRFRNGGMGLCVLNVDFARTRLSCNKVKGKYGSFAALKDFGDIGSVAYEDGAAEFDVADRKRRMRAEQQISGQGLWVRMNLQQIGQPKSSNGYGRQKSEKEGATKSDNKLPSVKSNSSSRLAGTGVVTGNKGGGYGSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGIFHATNSDKDFGIILKMARLTKAASLQGQGSGVEFVSEAPSKTLIIPANDLAQVIAKDVAVSRDGLPSESHYDMHHEIMVDSVISQSCHVETGRELQRWVPDEDDQQCPELENIFDGPWNRWGWDQFETNEMLFGVKSTFNEDFYTTKLEIGPQTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGKGVDDSGYDENEDRLLDSHNSETFDNIYGLVNKSPGEASGRKGSNGAQTWSNFSSVNHSELSQSSSGVDLCRSGSKDHAKQLASELPALSCSFSDGESRIQLNSVNNLHGVNDNTVEENWIQAEDVQLLKSEDLQSSLKLKKDGSDEGGLSTNVALCAPSTRILSKTPKETGSVGESKSVISRGRLGRSLGSDYVAATSGPGLSPSSSVGSLSSEKSTLNPNAKEFRLNPNAKSFIPSQSHARPRSPMSDGSFYFPATVSTIPNMPAMSMGIGVGTTFAGPQPVVYNPQAAQMPSQPYFHPNGPQYGQLLGHPRQVLYMPSYLPEMPYKGRDH 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00044 1409 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 27 649 - -
Gma16g00044 1409 MobiDBLite consensus disorder prediction 814 831 - -
Gma16g00044 1409 Gene3D alpha/beta hydrolase 146 324 IPR029058 -
Gma16g00044 1409 SMART LsmAD_2 1007 1076 IPR009604 -
Gma16g00044 1409 MobiDBLite consensus disorder prediction 1 43 - -
Gma16g00044 1409 Gene3D - 853 909 - -
Gma16g00044 1409 MobiDBLite consensus disorder prediction 1275 1322 - -
Gma16g00044 1409 MobiDBLite consensus disorder prediction 21 38 - -
Gma16g00044 1409 Pfam LsmAD domain 1007 1075 IPR009604 -
Gma16g00044 1409 Pfam Lecithin:cholesterol acyltransferase 132 628 IPR003386 GO:0006629|GO:0008374
Gma16g00044 1409 MobiDBLite consensus disorder prediction 792 839 - -
Gma16g00044 1409 MobiDBLite consensus disorder prediction 1273 1324 - -
Gma16g00044 1409 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 27 649 - -
Gma16g00044 1409 Pfam Ataxin 2 SM domain 846 930 IPR025852 -
Gma16g00044 1409 SUPERFAMILY alpha/beta-Hydrolases 96 496 IPR029058 -
Gma16g00044 1409 Coils Coil 1028 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00044 Gma-Chr16 414062 431931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00044 148 649 Acyl Lipid Metabolism Gene Families AT5G13640 75.794 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00044 K00679 - gmx:100812643 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00338 07 2995029 3011867 Gma16g00044 16 414062 431931 GST