Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02316 ATGAGCATCGGAACAACACTTTCAACAACACCAAACCACTCTTTCCACTCCAACACCCGAACCAGTTTACTCAACACCGTTTCCCCAATCCAATTCCTCTCCTTCCGCAATCACACTCACAATCTCAGAGTCCTCTGTTTCTCTTCGAATCCGTCGCAGCAGCTGCCGCCGGTTGTGGTGGTTGGCTCCGCGAACGCCGACATCTACGTGGAGATCGACCGTCTCCCACGCGAAGGCGAGACTCTCGCGGCGAAGTCCGGCCAGACCCTCGCCGGCGGCAAGGGCGCCAACCAGGCCACGTGCTCCGCCATGCTCTCCTACCCGACCTACTTCGTCGGGCAGGTCGGCGACGACGCCTACGGCACCCTTCTCTCCGACGCGCTCCGTGGCGGTGGTGTTCGCCTCGATAGCCTCACCGTGGTGGCGTCGGCTCCCACGGGTCACGCCGTCGTCATGCTCCAATCCAACGGCCAGAACTCCATCATCATCATTGGCGGCGCCAACATGAGCTGCTGGCCCAGCACCTTGCCACGTCAGCATTTGGACCTTGTGGCCCAAGCTGGCATTGTTTTGCTGCAGAGGGAGATCCCTGATGCTGTCAACGTTCAAGTCGCACAGGCTGCAAGGAATGCTGGTGTACCAGTAGTGATGGATGCTGGGGGCATGGATGGGCCAATTCCGCCACAATTATTGAAATTTGTTGATATTTTGAGTCCTAATGAAACTGAACTTGCTCGCCTTACCGGAAGGCCAACAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGGGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTTGTAGAAGGAGAAAAACCAATTCAGCAGCCTGCCATACTTGCTAAAACAGTTGTCGATACAACTGGTGCTGGTGATACTTTTACTGCTGCTTTTGCTGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGCTGCTGCAGCTTGTCTTTGTGTTCAAAAAAGAGGTCACAATTTGGACTATCAGGAGCGGAATAACTGTGTATGGTAG 1077 0.5367 MSIGTTLSTTPNHSFHSNTRTSLLNTVSPIQFLSFRNHTHNLRVLCFSSNPSQQLPPVVVVGSANADIYVEIDRLPREGETLAAKSGQTLAGGKGANQATCSAMLSYPTYFVGQVGDDAYGTLLSDALRGGGVRLDSLTVVASAPTGHAVVMLQSNGQNSIIIIGGANMSCWPSTLPRQHLDLVAQAGIVLLQREIPDAVNVQVAQAARNAGVPVVMDAGGMDGPIPPQLLKFVDILSPNETELARLTGRPTGSFEEIAQAALKCHELGVKQVLVKLGEKGSALFVEGEKPIQQPAILAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAACLCVQKRGHNLDYQERNNCVW 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02316 358 PRINTS Ribokinase signature 60 81 IPR002139 GO:0016301
Gma15g02316 358 PRINTS Ribokinase signature 229 244 IPR002139 GO:0016301
Gma15g02316 358 PRINTS Ribokinase signature 159 172 IPR002139 GO:0016301
Gma15g02316 358 PRINTS Ribokinase signature 87 106 IPR002139 GO:0016301
Gma15g02316 358 PRINTS Ribokinase signature 273 284 IPR002139 GO:0016301
Gma15g02316 358 Pfam pfkB family carbohydrate kinase 58 348 IPR011611 -
Gma15g02316 358 CDD ribokinase 57 345 IPR011877 GO:0004747|GO:0006014
Gma15g02316 358 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 92 116 IPR002173 GO:0016773
Gma15g02316 358 Gene3D - 55 355 IPR029056 -
Gma15g02316 358 SUPERFAMILY Ribokinase-like 57 350 IPR029056 -
Gma15g02316 358 Hamap Ribokinase [rbsK]. 56 358 IPR011877 GO:0004747|GO:0006014
Gma15g02316 358 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 304 317 IPR002173 GO:0016773
Gma15g02316 358 PANTHER SUGAR KINASE 56 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02316 Gma-Chr15 49019114 49022332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02316 K00852 - gmx:100801418 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02316 15 49019114 49022332 Gma15g02316 15 49019114 49022332 ECH