Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01946 ATGTTCCGCATAAACAACACCCTGGTCGGAATCCTCCACACACTCCCCTTACTCCTGAGTATCGCCGCCATGGGCGACTCCGCCTACATCCGCGTCCACGGCGACTGCCAGAAGGTGCTCCAGTACCCGCTCCTCTTCGGCGGCCTCTTCATATTCGTCATCTCCACCCTCGGCCTCGTCGGCGTGCTGTGCCGCGTCAACGCCGCCCTCTACCTCTACCTCCTCGCCACGTTCTTCGTCATCCTCGCCTTCTCGCCGTTCACCATTGTAGCGCTCTTCGTCACCAGAAACAACGCGCCGGATCGGGCGGGGCCGTCGGTGGGGTATGGAGTAGGGGATTTCTCGCCCTGGCTGCAGCACTACGTCACCGACCAGCGAAACTGGGACGTGGCCCAGAGTTGCTTGGTGCAGAAGCGCGAGTGTCACGGCCTCGCCGTGGACGCTAACAATAATGACTCTCTCGCTTTCAAACGGTTAACTACCACGCAGATCGGGTGCTGTAAGCCACCGTTGCGATGTGGATTCACAAAGAAGAACGCTACGTTCTGGGAAGCGCCAAAAGCGGGTCCATTAGCGAACGACACTGATTGCAGGACATGGAGCAACAGACAAGACAAACTGTGTTTCAACTGCGATTCGTGCAAAGGAGGAGTGCTGGCCAACATCAGAAGCCAGTGGAGACATCTCACCATATTCAATGCATGCGTGCTCGTGCTCGTCACCATCATCTATGTCTTGGGCTGCTACGCCATCAGGAACAATCGGTTGGAGTACTCCAACTACACCACCCAGAGAAAGATCAGAATGAGAATACCCTCCACAGTAATTTGA 831 0.5632 MFRINNTLVGILHTLPLLLSIAAMGDSAYIRVHGDCQKVLQYPLLFGGLFIFVISTLGLVGVLCRVNAALYLYLLATFFVILAFSPFTIVALFVTRNNAPDRAGPSVGYGVGDFSPWLQHYVTDQRNWDVAQSCLVQKRECHGLAVDANNNDSLAFKRLTTTQIGCCKPPLRCGFTKKNATFWEAPKAGPLANDTDCRTWSNRQDKLCFNCDSCKGGVLANIRSQWRHLTIFNACVLVLVTIIYVLGCYAIRNNRLEYSNYTTQRKIRMRIPSTVI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01946 276 PANTHER TETRASPANIN-8 1 262 - -
Gma15g01946 276 Pfam Tetraspanin family 8 247 IPR018499 GO:0016021
Gma15g01946 276 PANTHER TETRASPANIN-8-RELATED 1 262 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01946 Gma-Chr15 28982733 28985653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01946 1 255 Miscellaneous Gene Families AT1G18520 42.264 5.29e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01946 - - gmx:100794164 567.385