Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01926 ATGGCAGGAGGGTCTTTCACAACAGGCACTGTGAGCAAGGAGAGGGCAGAGCAGTACAAGGGGAGAGTCACTGCTTATGTCATCATCTCTTGCATTGTTGCTGCCACAGGAGGGGCTCTCTTTGGCTATGATATTGGAATTTCAGGTGGGGTTACATCCATGGATGACTTTCTTATAGAGTTCTTCCCCTCAGTATACAGACAGAAAAAGCATGCCCATGAAAACAACTACTGCAAGTATGACAATCAGGGCCTAGCAGCATTTACCTCTTCTCTGTACATTGCTGGTTTAGTTGCATCCCTGATGGCATCCCCTGTGACAAGAAAGTATGGACGTCGAGTAAGTATCATAGGTGGTGGTATCAGCTTTCTTATTGGATCAGCTCTGAATGCTTCAGCTGTTAACCTGATAATGTTGATCTTAGGCCGGGTTATGCTTGGTGTTGGCATTGGATTTGGAAATCAGGCTATTCCGCTTTATTTGTCAGAGATGGCACCAACACACCTTCGAGGAGGCCTGAACATGATGTTTCAAGTTGCAACCACTTTTGGGATTTTCACAGCTAACATGATCAATTTTGGAACACAAAAGATCAAGCCTTGGGGTTGGAGGCTGTCCCTAGGCTTGGCTGCAGTACCAGCTCTTTTGATGACTGTGGGAGGGATATTTCTTCCTGACACTCCAAATAGCTTAATTGAACGAGGATTGGCGGAAAAAGGAAGGAAGCTGCTGGAGAAAATCCGAGGAACCAAGGAAGTTGATGCAGAGTTCCAAGATATGGTTGATGCAAGCGAGTTGGCAAAGTCCATAAAGCACCCATTTCGTAACATCCTTGAAAGAAGGTACAGGCCAGAGTTGGTGATGGCAATCTTCATGCCTACCTTTCAGATCCTGACTGGCATAAATTCCATTCTCTTCTATGCTCCAGTGCTGTTTCAAAGCATGGGATTTGGAGGAGATGCATCACTCATCTCTTCAGCTTTAACCGGTGGAGTTCTTGCTAGTTCAACGTTCATTTCCATAGCAACAGTAGATAGGTTGGGCAGGAGAGTTCTTCTTGTCAGTGGTGGACTACAAATGATCACATGCCAAATCATAGTGGCCATTATTCTAGGGGTCAAGTTTGGAGCAGACCAAGAATTGTCAAAAGGGTTTTCAATTTTGGTGGTTGTGGTGATTTGCCTATTTGTTGTTGCTTTTGGGTGGTCATGGGGTCCACTTGGGTGGACAGTCCCTAGTGAGATATTTCCATTGGAAATCCGGTCAGCAGGGCAGGGCATCACAGTTGCTGTAAACCTTCTCTTCACTTTCATAATTGCTCAGGCCTTTCTTGCTCTTCTCTGCTCATTCAAGTTTGGGATCTTTCTCTTCTTTGCTGGCTGGATCACCATCATGACCATATTTGTTTACCTGTTCTTACCTGAAACCAAAGGGATTCCCATTGAGGAGATGTCATTTATGTGGAGGAGGCACTGGTTCTGGAAAAGGATTTGCCTCCCAACAGATGGTAGTATCTGA 1518 0.4526 MAGGSFTTGTVSKERAEQYKGRVTAYVIISCIVAATGGALFGYDIGISGGVTSMDDFLIEFFPSVYRQKKHAHENNYCKYDNQGLAAFTSSLYIAGLVASLMASPVTRKYGRRVSIIGGGISFLIGSALNASAVNLIMLILGRVMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFTANMINFGTQKIKPWGWRLSLGLAAVPALLMTVGGIFLPDTPNSLIERGLAEKGRKLLEKIRGTKEVDAEFQDMVDASELAKSIKHPFRNILERRYRPELVMAIFMPTFQILTGINSILFYAPVLFQSMGFGGDASLISSALTGGVLASSTFISIATVDRLGRRVLLVSGGLQMITCQIIVAIILGVKFGADQELSKGFSILVVVVICLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQGITVAVNLLFTFIIAQAFLALLCSFKFGIFLFFAGWITIMTIFVYLFLPETKGIPIEEMSFMWRRHWFWKRICLPTDGSI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01926 505 CDD MFS_STP 33 475 IPR044778 GO:0015145|GO:0015749
Gma15g01926 505 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 Pfam Sugar (and other) transporter 31 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma15g01926 505 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma15g01926 505 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Gma15g01926 505 PANTHER - 4 498 - -
Gma15g01926 505 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma15g01926 505 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 4 498 IPR045262 GO:0015144
Gma15g01926 505 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma15g01926 505 SUPERFAMILY MFS general substrate transporter 23 484 IPR036259 -
Gma15g01926 505 Gene3D MFS general substrate transporter like domains 13 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01926 Gma-Chr15 26702101 26706725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01926 1 497 Organic Solute Cotransporters AT4G02050 78.873 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01926 K24193 - gmx:100820434 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01926 15 26702101 26706725 Gma15g01926 15 26702101 26706725 ECH