Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01860 ATGGTTCCATTTCGGCAACTTCGAACAATGAAGCTCGCAACAAAGAAATTGGTGAAAGGCCAAGCTTCTGTGAATATTGCTATTGAAAATGCATATTCAAGGACCAATCAATACACGAGAGCGTACGACACGCGCTTCCTATTGGGTGCGTGGGAGCATCACACTGCCCTGCAAAAGCAGCACGTGTCAACGCGTCAAACTGAGTTGGTTAAACGCGCCACGTGGTATCCTCCTATCGGTCGAAGACACAGATTCCATCCCAGCCGTCGGAACCATCATCCAACAACACATATACTACTACTTGCAGTTGCCACCACAGCCTCTGACTGTCTAGAGGGACATTGGCTCCCCACGGATGTGCCCAGAGCAAGATTGTTGCACCTACTCCCGTGTTCTAAAATCATGATTTCTACACAAAAGGCTGAAATAGACACCACTGTTCAAAATTGCCTAGATGTTTCCTCAAGGACGCAGCCCAAAGACATTGCATGTGATCAATCTATTGATAACAAAGAATTTCTGGATAAAGAAAACTCTGAATCTGAGCACCAATTTTCTGTTTGTTCCTCTGTCCTGGGAAAAATGGAACTAACCAACACCTGCACAGCAAACTTAGAAACAATTTTTTCTCCTGCTTTTGAGCCCATTGAAGTCCATTCACAACATTATACTGAGAAAGATGCAGTGAGCATTGGTGATACAAACATGGCCGAAGTGGGAGCTGATGAAGGAAGAAGCATATGTGGTTATGAAACATGCGATGTATCAGACTTCTACATTTCTGACATGATCATTACAAACTTACCCTTTGGGGGGAATTCCTTTGATGATGATATCAGTGAAACCAACTGCCTATCTGATTATGGATCTACTGAGCCATCCATGTTTACCGCGTCTGAACAGTACATGATCCTGCCTGCTCTTGAAGATGATATTAAAGTTGGCACTACTTCTGATATCATATCATATGAAGAAACCATGATGGTTCGAGAAAGTGCTAGTTTGTATTCAGCAATGGGTCAGATAAGATCCTGCAACCAGGAGTCTGATGTTAAAAGTGACTTGGATAAATCAGAGTGCTTTGATCCACAGTCATTTATCAAGAATTTACCAGAACTATCAGAAATAGAAGTAAATGGGAAGCCAACCCTAATTCCTAAGCAATCTCCTAGAAGAAAGTCAATAACTCTGGTGCTGGACTTAGATGAGACACTTGTTCATTCTACATTGGAACACTGTGATGATGCGGATTTCACTTTTACTGTCTTCTTCAATTTGAAAGAGTACATAGTATATGTAAAACAGAGGCCTTATCTCCACACATTCTTGGAGAGGGTATCAGAGATGTTTGAAGTAGTAATTTTTACTGCCAGCCAAAGCATATATGCAAAGCAACTACTTGATATATTAGATCCTGATGGAAGATTTATTTCTCGTCGCATGTATCGAGAATCATGCCTTTTTTCAGATGGAAATTACACAAAAGATCTTACTATATTAGGTGTTGATCTTGCAAAAGTTGCCATAATTGATAATTCACCTCAGGTTTTCCGATTGCAAGTGAATAATGGTATTCCTATAAAGAGTTGGTTTGATGATCCATTAGATTGTGCACTGATGTCATTACTTCCCTTTCTAGAGACCTTGGCTGATGCTGATGATGTCCGTCCTATCATTGCAAAGAGATATGAATTGGTTCCCCTTCTCTCAGTTGACAAATGTGGAGTTCTGTGTTTCTCTCGAAAGGTCTGA 1752 0.4092 MVPFRQLRTMKLATKKLVKGQASVNIAIENAYSRTNQYTRAYDTRFLLGAWEHHTALQKQHVSTRQTELVKRATWYPPIGRRHRFHPSRRNHHPTTHILLLAVATTASDCLEGHWLPTDVPRARLLHLLPCSKIMISTQKAEIDTTVQNCLDVSSRTQPKDIACDQSIDNKEFLDKENSESEHQFSVCSSVLGKMELTNTCTANLETIFSPAFEPIEVHSQHYTEKDAVSIGDTNMAEVGADEGRSICGYETCDVSDFYISDMIITNLPFGGNSFDDDISETNCLSDYGSTEPSMFTASEQYMILPALEDDIKVGTTSDIISYEETMMVRESASLYSAMGQIRSCNQESDVKSDLDKSECFDPQSFIKNLPELSEIEVNGKPTLIPKQSPRRKSITLVLDLDETLVHSTLEHCDDADFTFTVFFNLKEYIVYVKQRPYLHTFLERVSEMFEVVIFTASQSIYAKQLLDILDPDGRFISRRMYRESCLFSDGNYTKDLTILGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPLDCALMSLLPFLETLADADDVRPIIAKRYELVPLLSVDKCGVLCFSRKV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01860 583 SUPERFAMILY HAD-like 384 560 IPR036412 -
Gma15g01860 583 ProSiteProfiles FCP1 homology domain profile. 390 549 IPR004274 -
Gma15g01860 583 Gene3D - 380 563 IPR023214 -
Gma15g01860 583 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 130 565 - -
Gma15g01860 583 CDD HAD_FCP1-like 395 527 - -
Gma15g01860 583 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 130 565 - -
Gma15g01860 583 Pfam NLI interacting factor-like phosphatase 396 556 IPR004274 -
Gma15g01860 583 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 396 559 IPR011948 GO:0016791
Gma15g01860 583 SMART forpap2 393 537 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01860 Gma-Chr15 23318517 23336085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01860 K17616 - gmx:100799803 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01860 15 23318517 23336085 Gma09g00821 09 11804299 11815921 GST