Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01832 ATGGATCACCACGAGGATGAAAGTAACAGCAAACAAGACGATGAGGAAGCTGTTGCTCGCCTTGAGGAAATAAAAAAATCTATTGAGGCGAAGCTGGCTTTACGGCAAAGCAATTTGAATCCAGAAAGGCCTGATTCAGGATTTTTAAGGACATTGGATTCTAGCATTAAGCGCAACACTGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAAGCTCTGATGGACGAGTTGCGAAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCTGTGGCTGCTATATGTGATGCCAAGCTTAGAAGTTCTGATATACAAGCTGCAGTTCAGATCTGTTCTTTGCTTCATCAAAGGTACAAGGACTTTGCACCAAGCCTGGTTCAAGGGCTTCTCAAAGTCTTCTCTCCTGGAAAACCTGGTGATGAATCAGATACAGACAGAAATTTGAAGGCAATGAAGAAGCGCAGCTCTCTAAAGCTTATATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGTGGGATTTTTATCAATATCATAAAAGATCTTAGCAGTGGGGAACAGCTAAAAGATCGGGATGCTGCACAAACAAGTTTGACCCTTCTTTCGAGTTTTGCTCGCCAAGGGAGAATTTTTCTAGGACTTTCTGTTAGTGGGCCGGAAATTCATGAGGAGTTTTTTAAAGGCCTTAACATCACAGCAGATCAGAAGAAAGTTTTCCGGAAAGCATGCTATTCCTTTTATGATGCTGCAGCTGAACTACTTCAGTCTGAGCATTCTTCACTTCGCTTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGAGAGCTCAGTGATGAAAATATTGCTTCATATGAAAAGCTTCGTAAATCCTATGACCATCTGTACCGTAATGTTGCATCATTAGCAGAAGCACTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGCCACACAACTAGGGTTACCAGTGGTGAGGATGGGGTTTCTTCTGCTTCTGGTAAAGATTCTTCTGTTGTTGAACCCATATGGGATGATGAAGATACAAGGACTTTCTATGAATGTTTACCTGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAGCCAAAAAGCAGCGAGCAATCTGCGAAGAATCAAGACCTAACAACTGAAATATTACCTGAATCAGACAAAGGTCAACAGACCACTCATGAAAGTGGAGAGGTCTCTACAGAGTCTAATGCTTTGCCAGAGGCAGAAAGCACAGAAAGAGTGAAGGATAAGGAGGAAAAAGACAAGTCTAACGAATTGGACAGAGAGAAGGAAAAAGAAAAAGATAATGACAAAAAGGGAGAAAATGAAAAAGACAAACTCAGAAGTCTTGAAGGGACAAATTTGGATGCTCTACTGCAGAGGCTTCCGGGTTGTGTGAGCCGAGACCTTATTGATCAATTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAATGTACCAAGGACATCTCTGGAGCTGTTACCATATTATTCCCGCATGGTTGCCACACTCTCAACTTCTATGAAGGATGTCTGCTCCATTCTTTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGATCAGATGAACATTGAGTCCAAGATAAGGAACATCAGGTTCATTGGAGAACTTTGCAAGTTCAAAATTGCCCCTCCTGGCCTAGTCTTCAGCTGTTTGAAGGCCTGTTTAGATGATTTTACACATCATAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTGTATCGGTCTCCAGAAACTACTATACGCATGGCTAACATGTTGGAGATATTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCGAGACATAGCACTTTGGTGGAGAATGCATACTACCTCTGCAAACCACCAGAAAGATCCGCACGAGTAGCCAAAGTTCGTCCTCCATTGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAGTCTACCATTGAGCATGTGCTGAGGCAACTCCGTAAATTACCATGGAATGAATGTGAACCATATCTTTTGAAATGCTTCATGAAGGTCTACAAAGGAAAATATGGTCAGATCCACCTGATTGCATCTCTTGCTGCTGGATTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATCGTTGATGAGGTAGTTCTGGAGGAGATTAGAGTTGGGCTTGAGTTAAATGACTATGGGATGCAGCAAAGACGCATTGCTTACATGCGATTCTTAGGGGAGCTATACAACTATGAACATGTAGACTCATCTGTTATTTTTGAGACACTATATCTCATTCTCATCCATGGCCATGGGACATCAGAGCAAGATGTACTGGATCCACCTGAAGATTGTTTTCGCATGAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTGATCGTGGCTCTTCTAAGAGGAAACTTGATCGATTCCTAATACACTTCCAGAGGTATATTTTAAGCAAAGGGACACTGCCTCTGGACATTGAATTTGACTTACAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACACTTCTATCGAGGAAGTGAATGCAGCTCTAGTAGAACTCGAGGAACATGATCGGATTGTTTCTGCTGATAAGGTCAGCAGTGAAAAACATTCTGGCACTGAGAAGCCTTTAATTAGGACCACTTCCACTACTGCAGTGGTTGGCAATGGACAAAGCATTGATAATGGTACGGAAGAAAATGAAGTGCAAGATGATAATGACAGTGAGACTGATTCAGGGAGTGACACAATTGATGTGGAGGGACATGATGAAGAGTTGGATGAGGAGAATCATGATGATGGGTGTGAGACTGAGgatgatgatgatgatgatgatgatgGGCCTGGACCAGCTTCTGACGAGGAGGATGAAGTCCATGTGAGACAAAAAGTGACCGAGGTGGACCCTCTGGAAGAAGCCAATTTCGATCAGGAGCTCAAGGCTGTAGTACAGGCAAGG 3069 0.4148 MDHHEDESNSKQDDEEAVARLEEIKKSIEAKLALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLVQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLILELFFVGVIEDGGIFINIIKDLSSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGPEIHEEFFKGLNITADQKKVFRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNVASLAEALDMQPPVMPEDGHTTRVTSGEDGVSSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLLGETEPKSSEQSAKNQDLTTEILPESDKGQQTTHESGEVSTESNALPEAESTERVKDKEEKDKSNELDREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTSMKDVCSILLQMLEEEFNFLINKKDQMNIESKIRNIRFIGELCKFKIAPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIHGHGTSEQDVLDPPEDCFRMRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGTLPLDIEFDLQDLFVDLRPNMVRYTSIEEVNAALVELEEHDRIVSADKVSSEKHSGTEKPLIRTTSTTAVVGNGQSIDNGTEENEVQDDNDSETDSGSDTIDVEGHDEELDEENHDDGCETEDDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFDQELKAVVQAR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01832 1023 SMART if4_15 468 656 IPR003890 GO:0003723|GO:0005515
Gma15g01832 1023 SMART if4_15 56 278 IPR003890 GO:0003723|GO:0005515
Gma15g01832 1023 SMART if4_15 671 873 IPR003890 GO:0003723|GO:0005515
Gma15g01832 1023 MobiDBLite consensus disorder prediction 935 989 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 311 343 - -
Gma15g01832 1023 SUPERFAMILY ARM repeat 465 659 IPR016024 -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 990 1009 - -
Gma15g01832 1023 Gene3D - 8 318 - -
Gma15g01832 1023 Gene3D - 424 668 - -
Gma15g01832 1023 Gene3D - 669 897 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 327 341 - -
Gma15g01832 1023 SUPERFAMILY ARM repeat 72 188 IPR016024 -
Gma15g01832 1023 Coils Coil 11 31 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 899 1009 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 376 419 - -
Gma15g01832 1023 Coils Coil 428 448 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 420 459 - -
Gma15g01832 1023 Pfam MIF4G domain 673 867 IPR003890 GO:0003723|GO:0005515
Gma15g01832 1023 Pfam MIF4G domain 471 655 IPR003890 GO:0003723|GO:0005515
Gma15g01832 1023 SUPERFAMILY ARM repeat 666 892 IPR016024 -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 376 459 - -
Gma15g01832 1023 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 3 1021 IPR039762 GO:0000184
Gma15g01832 1023 Coils Coil 539 559 - -
Gma15g01832 1023 MobiDBLite consensus disorder prediction 913 934 - -
Gma15g01832 1023 PANTHER - 3 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01832 Gma-Chr15 22186147 22202469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01832 K14327 - gmx:100795746 1948.33