Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01820 ATGGATTCCCCACCTTCCCAGCACTCGTGGGGAAGGTCACCAACCTCCCTCTCCTCTTCTTCTTCATCTCTCTCCAAATCTAATTCTGATACAATCCAAAGCCTCTCTTCGATTTTGAACAATCCTCACGCCTCCGACGCTGCCTCCTGGGCCGGCTGGTGGTCCTCCTCCGCCTCCGCCGTCTCCGTCCCTGAATTCGCCCCTATCTCCGCCTCCAAGGCCGCCTCCGATGTCTCCCGATCTGACTTCCTCCCCTACCTTTCCCCCATCGCCGACGCCTTCCACCGCTTCGCGGACATCCGGAACCACGCCTCCAACGAACAGATCAATGCCGCCGCCGCCACCGCTGACGCCACCAATTCCGGCAGCGTCGGTCAGGGAAAGGCGCTGGTGGCGTGCCTCCGCGAGGTCCCGGCGCTCTACTTCAAGGAGGACTTCCGCCTCGAGGACGGCGCCACGTTCCGCGCCGCCTGCCCCTTCGCCAACGTCGCCGAGAACCTCGCGCTGCAGGAGAAGCTCTCGCACTACCTGGATGTCGTGGAGCTGCACCTCGTGAAGGAGATCTCGCTCCGGTCCTCATCGTTCTTCGAGGCGCAGGGGCAGCTGCAGGACCTTGATGCTAAGATCCTCCAGGGTTGCGAGCAGATTCGGCGCCTCAAGGACACCATTCGCCTCCTCGATGCCGATTTGGTCCATGATGCGCGCCAGATTCAGGAGCTCAACGGCACCAGGACCAACCTCCTCGCACTCCTGCAGAAACTCAGGCTTATATTTTACGTCAACCAGGCCCTCTCCGCTCTCAAATTGCTTGTTGCGTCTGCAGATTGTGCTGGAGCACTAGATGTGACTGATGATTTGCAACATTTGCTGGATGGAGATGAGCTCTCTGGTCTGCATTGCTTTCGTCATCTTAGAGATCATGTAATAGGCTTTATAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAGCTTCCTTACACGATGCTGCTGAAAAAGATGTGATAATTTTATCCAAAGCTAAAGCAAGAGCTTCCCTTCCAATGAATGGAAAGGATGATGAAGTAAAGTTGGAAGAAGAGGAAACCAATAATTTCAAAGATAGTCTTCTTCCTACTGTAATTGGATTGCTCAGAACTGCTAAACTTCCCTCTGTCCTGAGGACTTATCGAGATACACTGACTGCTGATATGAAGAGTGCTATTAAGACTGCTGTTGCTGAGTTGCTTCCGGTTCTTGCTTCTCGAGGTTCAGAGTCAGAATTCTTTTCTGGAGACAGAGCTGTGGATGCAGATGGTGGAGGTGCATCACTTGCTAGCAAGTTGCGGAGCCTATCATCTGACTGTTTTGTGCATCTTCTGAGTGCTATTTTCTTGATAGTACAGgcacatttagtgcgggctgctgaagtgaaaaaggccatcgaatggatcttaagcaaccgtgatggtcattatgctgctgattcagttgtggcggcaattgctcatggtgcTGCAGCTGCAGAAACATCCCAAGAAAGCGAGTCTCATGGTACTACATTTTTGCCATATTCAGCACAAAGAAGTGTTGCCAAGGGTTCTTCATTTCAGGGAAAAGCAATTGATTCTATGAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATATATTGCGAGAAAACGCAGAAGCTGTCTTTGCGGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTTGGGGTCCGTGCAATTCTTCATCCTAGGTTGAAATTGCTGGAGTTTCTAACCATATACAACATTACCCAGGAGTTCATTACTGCTACAGAAAAAATTGGTGGGAGGTTGGGATACAGCATCCGTGGGACACTGCAATCACAGGCCAAGGCTTTTGTTGATTTTCAGCATGAATCTCGGATGTCAAAGATTAAGGCAGTGCTTGACCAGGAAACCTGGGTGGAGATTGATGTTCCTGATGAATTTCAATCCATTATCAGTTTGCTTTTTACATCTGATAATTTGACTTCTGAGAACCTTAATGAAACCGAGGATGATATTTCTACCAGTTACAATTGTGTGGTGACTAACAATGATGTTCTGCCGATGGCAGACAGTTCAGAGTCAACTGCTGAACAGCAAATTATGCAGTCTAATTCCATTGAATCATCGATGAATAATGAAACACCAGATAGATCTAAATCCCCGGTTGATTCAACGGAACCAAATAAAGCTCATGGTAGGATTTCATCAGCACATAGTAACAATACTGAGAAAGACCATAAAAAATCTACATCTCAGGCTCTTTATTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCTTAATATTGTTGAAGATGTTGTCGGAGTACATTGATATGAACAACCTTTTGCCAACACTATCCTCAGAAGTTGTTCACCGTATAGTAGAAATCTTGAAGTTTTTCAACACAAGAACATGCCAACTTGTGCTTGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACGTCTAAACACCTGGCATTGGCAAGTCAAGTCATTAGTTTTGTACATGCTATTATTCCTGAAATTCGGCAGATTCTTTTTCTTAAAGTACCCGAGACTAGAAAAACACTATTGCTTTCTGAGATCGATCGGGTTGCTCAGGATTATAAAGTCCACAGAGATGAAATACATAGCAAATTAGTTCAAATAATGCGAGAAAGATTACTGGTACATTTACGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCCGAGGATGCTGACCCTCAGCCTAGTCAATTTGCTCGGTCCCTTACAAAGGAAGTTGGATACCTCCAACGTGTTCTATCTCGAACTTTGAATGAAGATGATGTTCAAGCAATTTTCAGCCAAGTGGTTGTTATATTTCACTCACAAATTTCCGAAGCATTTTCAAGATTTGATATAAGCACTCCTCAAGCACAGAATAGGCTATATCGGGATGTCAAACATATTCTTCAATGCATACGATCATTGCCATTGGGTGATTTGAGTAAATCTGATACCCCAAACTGGGGTCAGCTGGATGAATTCTTGGTGAAAAGATTTGGAAATGATGCTGCTCAATATGGGGGTGATTTAAACCTTCTTCACTCTGCATTTTCGTGTAACATTAAATTGAGGCCTTTGGTTGGTCTGTAG 3162 0.4456 MDSPPSQHSWGRSPTSLSSSSSSLSKSNSDTIQSLSSILNNPHASDAASWAGWWSSSASAVSVPEFAPISASKAASDVSRSDFLPYLSPIADAFHRFADIRNHASNEQINAAAATADATNSGSVGQGKALVACLREVPALYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLDAKILQGCEQIRRLKDTIRLLDADLVHDARQIQELNGTRTNLLALLQKLRLIFYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELSGLHCFRHLRDHVIGFIESINSILSAEFIRASLHDAAEKDVIILSKAKARASLPMNGKDDEVKLEEEETNNFKDSLLPTVIGLLRTAKLPSVLRTYRDTLTADMKSAIKTAVAELLPVLASRGSESEFFSGDRAVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKKAIEWILSNRDGHYAADSVVAAIAHGAAAAETSQESESHGTTFLPYSAQRSVAKGSSFQGKAIDSMSSSNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLLEFLTIYNITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMSKIKAVLDQETWVEIDVPDEFQSIISLLFTSDNLTSENLNETEDDISTSYNCVVTNNDVLPMADSSESTAEQQIMQSNSIESSMNNETPDRSKSPVDSTEPNKAHGRISSAHSNNTEKDHKKSTSQALYYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPEIRQILFLKVPETRKTLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEDDVQAIFSQVVVIFHSQISEAFSRFDISTPQAQNRLYRDVKHILQCIRSLPLGDLSKSDTPNWGQLDEFLVKRFGNDAAQYGGDLNLLHSAFSCNIKLRPLVGL 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01820 1053 Gene3D - 868 907 - -
Gma15g01820 1053 PANTHER VACUOLAR PROTEIN SORTING 54 1 1028 IPR039745 GO:0000938|GO:0042147
Gma15g01820 1053 MobiDBLite consensus disorder prediction 714 757 - -
Gma15g01820 1053 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 1028 - -
Gma15g01820 1053 MobiDBLite consensus disorder prediction 1 29 - -
Gma15g01820 1053 Pfam Vps54-like protein 770 900 IPR012501 GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01820 Gma-Chr15 21656697 21690561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01820 K17600 - gmx:100804432 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01820 15 21656697 21690561 Gma09g00780 09 10182569 10240385 GST