Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01774 ATGGCTCCAATACGCTCCACTGGATTTGTTGATCCTGGTTGGGATCATGGCATTGCTCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAATAGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCTGATGAAGTCTACCTGAAAATGAAAGAAAATCTTGAAGGCTGCCGTTCCCATAAGAAACAAAAACAAGTTGACACACAAGCATATATGAATTTTCACTCTAATGATGATGAAGATGAAGAAGAGCAAGTTGGGTGTAGAAGCAAAGGGAAGCAATTGATGGATGATCGAAATGTATCTGTAAATTTGACTCCTCTTCGCTCCTTAGGATATGttgacccagggtgggagcatggtgttgctcaggacgagagaaagaagaaagtcaaatgcaattactgtgagaaaattgtcagtggaggtattaatcggtttaaacaacatttggctagaattcctggagaggtagcaccttgtaaaagtgctccagaagatgttTATCTGAAAATAAAAGAGAACATGAAATGGCATCGTACTGGGAGGAGACTTAGGAGGCCTGAGATTAAGGAATTGATGCCTTTCTATGCAAAGTCCGATAATGATGATGATGAGTGTGAGCTAGTAGAAGATTTGCATCATATGAACAAGGAAACTTTGATGGATGTTGATAAGAGATTCTCTAAAGATATAATGAAGACCTACAAGGGAGTGTCACATAGTACTGGTCCTGAACCAGTATTGAGAAGATCAAGATTGGATAATGTTTACCTGAAACTACCCAAGAATCAGACTCCTCAAGCTTACAAACAAGTAAAAGTTAAGACAGGGCCCACTAAGAAATTACGCAAGGAAGTTATTTCTTCAATTTGCAAGTTCTTTTACCATGCAGGGATTCCTATACAGGCTGCAGACTCCCTATATTTTCATAAAATGCTGGAAGTGGTTGGTCAATATGGACAAGGACTGGTGTGCCCAGCAAGCCAACTTATGTCTGGTCGCTTTTTGCAGGAGGAAATCAATTCTATTAAAAATTACCTTGTTGAATATAAGGCTTCCTGGGCAATCactggttgctctataatggcagatagttggatagatacacagggtaggacaattattaactttcttgtttcttgtcctcatggtgtatactttgtttcttcggttgatgccactaatgtagtggaagatgcaccaaatttattcaagcttctggacaaaatagtggaagaagtaggtgaggaaaatgtagtgcaggtaatcactgaaaatactcccaattataaggctgctggaaaaatgcttgaagagaagagaaggaatttattctggacccctagtgccacttattgtattaattgtatgcttgaagattttatgaaaataagatgtgtggaagagtgcatggaaaagggccagaaaattaccaaactaatatacaatcaaatatggttgttaaatcttatgaaaagtgaatttacccggggccaggagcttctaaaaccagctgccacccagtttgcctctagctttgctacactactgagcttgctggatcatcgagttgctctcagaagaatgtttctttccaacaaatggatttcatccagattttccagctcaaatgaggggaaagaggtggaaaaaatagttttgaatgtcacattttggAAGAAGATTCAGCATGTTAGGAAGTCAATAGATCCCATAATGCAAGTACTTCAAAAGCTTTATAGTGGTGAGAGCTTGTCAATGCCATATCTATATAACGATATGTACAGGGCAAAACTTGCAATCAAATCTGTTCATGGTGACGATGCACGTAAATATGAACCATTCTGGAAGGTCATAGACAGTCATTGGAATTCTCTGTTCTGTCACCCTCTTTACTTGGCTGCATACTTCTTAAATCCATCATACCGATATCGTCAGGATTTTGTGGCGCATTCTGAGGTAGTACGAGGACTCAATGAATGCATTGTCCGGCTGGAGCCTGATAATATGAGACGGATATCCGCATCAATGCAGATTGCTCATTATAATGCTGCACAAGACGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTAGAACCTGCTGCTTGGTGGCAACAGCACGGAATAAGTTGCTTAGAGTTGCAAAGAATAAGTGTACGCATATTAAGTCAAACATGCTCGTCCTTTGCATGTGAGCATGATTGGAGTATATATGATCAGATACGTTGCAAAAGACAAAATCGTCTATCTCAGAAGAAATTGAATGACATTATATATGTCCACTACAACTTGCGACTTAGAGAATGCCAATTAAGAAAAAGGTCCAGGGACTCGAAGTTGTCCTCTGTTGACAGTGTTCTGCAAGAGCATTTACTCGATGATTGGATAGTAGATACTAATGTGCAAAACTTTGATGTTGATAAGAATTTCCTATTTGGAGTTGAACTAGATGATGAATATGAAAACGATTCAATTGATTATGAAGATGGAGCTGCAAGGCATCTAAAGGGATCCCTTGAGCTGGTGACTATGGCTGATGTAGCAGTAGGATCACCAGATGTAGATCATGCTAACATTGATGCTGACACTGATGATGAGTCTGATCTGAATTATTTTGATGATGATTTGAGCGAGTAA 2703 0.2823 MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPDEVYLKMKENLEGCRSHKKQKQVDTQAYMNFHSNDDEDEEEQVGCRSKGKQLMDDRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKSAPEDVYLKIKENMKWHRTGRRLRRPEIKELMPFYAKSDNDDDECELVEDLHHMNKETLMDVDKRFSKDIMKTYKGVSHSTGPEPVLRRSRLDNVYLKLPKNQTPQAYKQVKVKTGPTKKLRKEVISSICKFFYHAGIPIQAADSLYFHKMLEVVGQYGQGLVCPASQLMSGRFLQEEINSIKNYLVEYKASWAITGCSIMADSWIDTQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPNLFKLLDKIVEEVGEENVVQVITENTPNYKAAGKMLEEKRRNLFWTPSATYCINCMLEDFMKIRCVEECMEKGQKITKLIYNQIWLLNLMKSEFTRGQELLKPAATQFASSFATLLSLLDHRVALRRMFLSNKWISSRFSSSNEGKEVEKIVLNVTFWKKIQHVRKSIDPIMQVLQKLYSGESLSMPYLYNDMYRAKLAIKSVHGDDARKYEPFWKVIDSHWNSLFCHPLYLAAYFLNPSYRYRQDFVAHSEVVRGLNECIVRLEPDNMRRISASMQIAHYNAAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRISVRILSQTCSSFACEHDWSIYDQIRCKRQNRLSQKKLNDIIYVHYNLRLRECQLRKRSRDSKLSSVDSVLQEHLLDDWIVDTNVQNFDVDKNFLFGVELDDEYENDSIDYEDGAARHLKGSLELVTMADVAVGSPDVDHANIDADTDDESDLNYFDDDLSE 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01774 900 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 48 - -
Gma15g01774 900 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 45 838 - -
Gma15g01774 900 Pfam hAT family C-terminal dimerisation region 715 786 IPR008906 GO:0046983
Gma15g01774 900 SUPERFAMILY Ribonuclease H-like 370 788 IPR012337 -
Gma15g01774 900 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Gma15g01774 900 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Gma15g01774 900 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Gma15g01774 900 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Gma15g01774 900 PANTHER OSJNBA0013A04.12 PROTEIN 11 48 - -
Gma15g01774 900 PANTHER OSJNBA0013A04.12 PROTEIN 45 838 - -
Gma15g01774 900 Pfam Protein of unknown function (DUF 659) 345 496 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01774 Gma-Chr15 19924058 19927544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01774 - - gmx:100784818 1817.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01774 15 19924058 19927544 Gma15g01774 15 19924058 19927544 ECH