Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01734 ATGCTAGCTTCTTCGCTCTCCTTCCTCCATTCTTGCACATCCCCCTCTTCCTCTTCCTTATTGTCAATTTCACCTCCAAACCCCAAACCCTCTCACTTCCTACCTTTCGTGGTCGAAGCCAAAGACAGGACCCGCAGGGAAGACAGGACCGCTCGCCACACTCGCATCAGAAAGAAGGTCGAAGGGACGCCCGAGAGGCCGAGGCTGTCCGTGTTCCGGTCGAACAAGCATCTCTCTGTGCAGGTGATTGATGACACCGCAATGCGCACGCTTGCTTCGGTGTCGACAATGCAGAAGACGGTTGCTGATGAGTTCAACTACTCCGCTGGCCCTACAGTTGAAGTAGCAAAGAGGATGGGTGAGATCATTGCAAAATCCTGTTTGGAGAAGGGGATCACAAAGGTTGCCTTTGATCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCCCGTGAACATGGCCTAGATTTCTAA 489 0.5276 MLASSLSFLHSCTSPSSSSLLSISPPNPKPSHFLPFVVEAKDRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTAMRTLASVSTMQKTVADEFNYSAGPTVEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01734 162 CDD Ribosomal_L18_L5e 56 160 - -
Gma15g01734 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Gma15g01734 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gma15g01734 162 SUPERFAMILY Translational machinery components 45 160 - -
Gma15g01734 162 TIGRFAM L18_bact: ribosomal protein uL18 46 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Gma15g01734 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 - -
Gma15g01734 162 Gene3D - 43 162 - -
Gma15g01734 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01734 Gma-Chr15 18881231 18884379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01734 K02881 - gmx:100778569 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01734 15 18881231 18884379 Gma15g01734 15 18881231 18884379 ECH
Gma15g01734 15 18881231 18884379 Gma09g00722 09 8711944 8714326 GST