Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01657 ATGGTTCCCATGGCCGGCACCACCGCCACCGGCAGTAGAAAAATCGAAACATACGAAGAGTTTGAGAAAGTTCACGCGCTGCTCCTCGCGGCGTCGGGGCTACCGGAGCGGCTACACCGGCGCCTCTTCGAGAAGCTCTCCTGCGAGCACTTTGACGGAGGCGATCACTTCCAGATCGAGCCGTGCGAGGAGGGCCGCCAGAGGCGCCTCGTCCTCACGTCGGCGTCCATGCCGCGGGACTCCGACGTCTTCCTCGTCGACCACGCGTGGACCTTCAGACTCTCCGACGCCTACACGCAGCTAAGTAAGGTTCCGGGGTTGGCTGAGAGGATGGGGTCTTTGATGTGTGTGGATGTTGATGTCGATGTGAGTTTGGATGCTGAAGATGAAGCTGAAGTGAATGATGAACGTGATGTTGTGGAAACTTTGGAGAGTGAAGTTCGAGAGGCGAAGGAGAATGGAGATGGCACGTTGAGGTGGTTGGAGCTTGAGGGGCTTCACATTGATGATGATATGCTTGTGTCTCTCGCCTTATCAACTAGGTTTCCGGAGTTAGTGGCACTTAGCCTTCTTGGAAACAAGCTCAATAGTGCTGAAGTGGTTTTTCAAGAACTTATCAAACTTAAGCATCTTAAAGGAATCTGGCTCAACAATAACCCTGTTCTTAAAAATTGTGATGGTGAGCTTGAACAGGTGATTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAAGTTTAACGGGCAATTTTGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGTTATATGGAAAGGATAATCCTGGAAATGCTGATCAGACTGATACTCTGCTGCACACTGTGTCTACTCTGGACCTTTCAAATAGAAACATTCACAATTTAATCAAGAAGGCATTTTCACCCATTTGTTTGCCATCTCTTTCTTACTTGAATATTCGAGGAAATCCATTGGAGCAAAACTCAGTTGGTGACTTGTTAGATCTGCTGAGGAGATTCCCTTGCTTGCGTTCATTGGAGGTGGATATTCCTGGTCCGCTTGGAGGAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCAGTGCATCCAAAATATTGGAAACTGGAAAGCATATTATTGATTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTCTTGCTGATCGTATTATAAATGCGATGTGGCAATATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGATGAAACATCTGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTCTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAATGTTTGTAAAGGTGATGAGTGCACACGTGATTTTCTTCTTGGTATTGGGGAGGATAAACAACGTTCTGCCAGGCTTACAGCCTGGTTCCACACTCCAGAGAACTATTTTATCCATGCATATGAAAAGCACCATCAGAAATTGTTGTCCACAAGTTTAATGCTGCCCACCTTTCAGTCTTCTGAAACTAGAAGCATTCATCAACCTGGTGGGCGTCCATTACGTGTTTACACAGATATACCTCATGTAGAGGAATACTTGACTCATCCGAAGTTTGCAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAGGATATGAAGAAGGCCACAGGAATTACAGATCAACAATACATCAATCAATTTCCTTTTGAGGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACACACCTATCTCAGCTTATTGGTGACTATTGTGTACGCAAAAAGGAAGGACTAGACAATCTCTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACCGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAGATTTGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAGGGGAGAAAGTTTGATCTCCGTTACATATTACTGGTTCGGAGCATGCACCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATTGCCAACAACCAATATTCTTTGGACAGAAGTAGTTTGTTTGAATACGAAACTCACTTCACTGTTATGAACTATCGTGGAGCAATAAATCATAAGAATGCTAGCGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATAATTCGATCAGTGTTTGAGGCAGCTGCTGTTACTCATCCTGAGATGCATAGTCCAACATCACGGGCAATGTACGGTGTAGATGTCATGTTGGACAGCTCTTTTCAACCCAAGTTACTAGAGGTGACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGCGAGGGAGGCGTTGCCAAAGCTAGTGATTTCTTCAACAATGTGTTTAGGTGTCTCTTTTTGAACGAAATTTCACAGGTTAGCCCATTGTAA 2625 0.4427 MVPMAGTTATGSRKIETYEEFEKVHALLLAASGLPERLHRRLFEKLSCEHFDGGDHFQIEPCEEGRQRRLVLTSASMPRDSDVFLVDHAWTFRLSDAYTQLSKVPGLAERMGSLMCVDVDVDVSLDAEDEAEVNDERDVVETLESEVREAKENGDGTLRWLELEGLHIDDDMLVSLALSTRFPELVALSLLGNKLNSAEVVFQELIKLKHLKGIWLNNNPVLKNCDGELEQVILKELPELEIYNSSLTGNFGEWALGFCAGLYGKDNPGNADQTDTLLHTVSTLDLSNRNIHNLIKKAFSPICLPSLSYLNIRGNPLEQNSVGDLLDLLRRFPCLRSLEVDIPGPLGGSAIEILESLPNISELNGISASKILETGKHIIDSMLLPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVCKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIHAYEKHHQKLLSTSLMLPTFQSSETRSIHQPGGRPLRVYTDIPHVEEYLTHPKFAITKEPKDADIIWTSVQVDEDMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRKKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGRKFDLRYILLVRSMHPLEIFLSDCFWVRIANNQYSLDRSSLFEYETHFTVMNYRGAINHKNASDFVREFEEEHQVKWLDIHTRVRKIIRSVFEAAAVTHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKASDFFNNVFRCLFLNEISQVSPL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01657 874 Pfam Tubulin-tyrosine ligase family 592 842 IPR004344 GO:0036211
Gma15g01657 874 Gene3D Ribonuclease Inhibitor 127 248 IPR032675 -
Gma15g01657 874 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 13 873 IPR027749 -
Gma15g01657 874 SUPERFAMILY RNI-like 158 365 - -
Gma15g01657 874 Gene3D Ribonuclease Inhibitor 265 370 IPR032675 -
Gma15g01657 874 ProSiteProfiles TTL domain profile. 538 866 IPR004344 GO:0036211
Gma15g01657 874 Coils Coil 133 153 - -
Gma15g01657 874 Gene3D - 668 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01657 Gma-Chr15 17150614 17156444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01657 K16609 - gmx:100809212 1780.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01657 15 17150614 17156444 Gma15g01657 15 17150614 17156444 ECH
Gma15g01657 15 17150614 17156444 Gma09g00637 09 7220243 7223002 GST