Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01563 ATGAATATGTACCAATtgcaacagtttcatattcaacccatgatgcaacagtttcatattcaacccatgatgAAGATGGATAACACGATGAGGAAGAGGGAGAGAAGCAAAGCCATGGAGAAAGAGAGGCTTCAAGTGATGGACTTGAGTGGCATGTCCTTGGAGTTTCTTCCCAAACCTTCGCTTGATTTAGCCACCATTTGCAAGTTGGACCTATCTAATAACAATCTCCAGGAAATTCCGGAATCCTTAACGGCTAGACTTCTAAACGTGGAAGTGTTGGACGTGCGTTCCAACCAGCTAAACTCCCTTCCCAATTCCATTGGCTGCCTCTCTAAGCTCAAGGTTTTGAATGTCTCAGGCAACTTCATCGAATCCCTCCCCAAAACCATTGAGAATTGCAGAGCCTTAGAAGAGCTGAATGCAAACTTCAACAAGCTGAGCAAGCTGCCAGACACAATAGGGTTTGAGCTCATAAACCTAAAGAAGCTCTCAGTGAACTCCAACAAGCTTGTGTTTCTTCCAAGCTCCACTTCACACTTAACAGCTTTGAAGGTTCTTGATGCACGATTGAATTGCCTAAGGGCACTTCCTGAGGACCTTGAGAACCTCATCAACCTAGAGACCCTTAATGTGAGCCAGAACTTCCAGTATTTGGAGACCATCCCTTACTCCATAGGGCTTCTCTGGTCACTTGTTGAACTTGATGTTAGCTACAATAACATCAAGACCTTGCCTGAGTCAATTGGGTGCCTCAAGAATCTCCAGAAGCTGAGTGTTGAAGGGAACCCTCTTACCTGTCCCCCTATGGAGGTGGTGGAACAAGGACTTCATGTGGTGATGGAGTACATGCATCATAAGATTAACTCAAGTGATCAAAACAAAACTAAGAAAAGGTGGTGGATGGGGAAGATTGTGAAATGTGGAACCTTCAATAAACAATTTAGAAATGGGAAACGACCTGAACATGTGGGTTACAACATGCTTAAGCACCAGAATATCAATGGTCTTGCTTCCCCAGGCTTCATGGGGATGCTCTCCCCTCTTCGCCTGTTCTCTCCCCATCGTTCCCCCCGCCATTTCTTCAGTTGA 1092 0.4304 MNMYQLQQFHIQPMMQQFHIQPMMKMDNTMRKRERSKAMEKERLQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLNSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETIPYSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEYMHHKINSSDQNKTKKRWWMGKIVKCGTFNKQFRNGKRPEHVGYNMLKHQNINGLASPGFMGMLSPLRLFSPHRSPRHFFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01563 363 SMART LRR_typ_2 135 157 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 64 87 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 158 180 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 88 110 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 111 134 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 229 252 IPR003591 -
Gma15g01563 363 SMART LRR_typ_2 181 204 IPR003591 -
Gma15g01563 363 ProSiteProfiles Leucine-rich repeat profile. 113 134 IPR001611 GO:0005515
Gma15g01563 363 Pfam Leucine rich repeat 69 122 IPR001611 GO:0005515
Gma15g01563 363 ProSiteProfiles Leucine-rich repeat profile. 66 87 IPR001611 GO:0005515
Gma15g01563 363 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 354 - -
Gma15g01563 363 ProSiteProfiles Leucine-rich repeat profile. 231 252 IPR001611 GO:0005515
Gma15g01563 363 SUPERFAMILY L domain-like 40 268 - -
Gma15g01563 363 SMART LRR_bac_2 181 200 - -
Gma15g01563 363 SMART LRR_bac_2 134 153 - -
Gma15g01563 363 SMART LRR_bac_2 158 177 - -
Gma15g01563 363 SMART LRR_bac_2 229 248 - -
Gma15g01563 363 SMART LRR_bac_2 88 107 - -
Gma15g01563 363 SMART LRR_bac_2 64 83 - -
Gma15g01563 363 SMART LRR_bac_2 111 130 - -
Gma15g01563 363 Gene3D Ribonuclease Inhibitor 217 288 IPR032675 -
Gma15g01563 363 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 354 - -
Gma15g01563 363 Gene3D Ribonuclease Inhibitor 6 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01563 Gma-Chr15 15067890 15072336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01563 52 348 Receptor kinase-like Gene Family AT5G51350 30.547 4.82e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01563 - - gmx:100775711 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01563 15 15067890 15072336 Gma15g01563 15 15067890 15072336 ECH
Gma15g01563 15 15067890 15072336 Gma09g00555 09 5953739 5958084 GST