Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01473 ATGTTGGAAAGGGAGAGTGCAGGGTATAATATACTCTTAACTGGGGAATCATTATCGATTCCAATTGCACGCGCAAATGCAGATGCTGATGCTGATGTTGTCACGACAACCGCTCAAGACCACTACCTCCCTGTCTCCTTCAACCAGGCCATCAGTGCAACGATGCCGTTCTTCACCGCGATTTTTGCATTTTTGATCACATGCAAGAAGGAGACTGGGGTGGTGTTCGGTATCGTTGTGACGGGCAACAGTGAAGCGGAGAAGACATCACCACCTCTCTCTCTGGCGCGATGGAGACGACGGAGGCCTTGGGTTTCTTGTATTCTTTGCAAACTAACTTATTTCATAAAGCTGACATCGATTCTTCGATCGGTAAAAGGAGGAACATTGAGAGCTTCTGATTCATTCCCTACTGGTCGACATCTAGTTGAGTTATGGGCTCCAAATTCCCAAAAGCTTCCAAAAACATCAGTTTTGAACAGCATAAAACTTCAGCAACCTAATGGCATTTACTATGAAGACATAACATTTAGGGACATCCTCTTTGATTCTAGCTACAAGGGTGGAGGGATATTCATTGTTGATTCTGTTAGAACAAGAATCAACAACTGCTTTTTCTTGCATTTCACCACAGAAGGGATTCTAGTCCAAGGTGGCCATGAGACCTTCATAACAAGCAGTTTCCTTGGGCAGCACTCAACAGTTGGTGGAGATCCAGGGGAGAGGGATTTCTCTGGCACTGCCATTGATCTTGCCAGCAATGACAATGCAATCACTGATGTTGCAATTTTCTCCGCAGCCATAGGGATTGTTCTTAGGGGTCAGGCCAACATGCTCACTGGGGTGCATTGTTATAACAAGGCCACAGGCTTTGGTGGCATTGGCATTTTGGTGAAACTAGCAGGGAATTCACAAACTAGAATTGATAATTGTTACATGGACTATACAGGTATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACTAATGGGTTTTTCTTAGGGGATGCTAACATAGTTTTGAAGTCAATTAAGGGGCAAGTTTCTGGTTTGAATATAGTTAACAATATGTTCACTGGGAACCCCAATAATAAGGTTCCAATTGTGACCCTAGATGGCCAATTCAGTAACATTGACCAAGTGGCGATTGATAGGAACAATGTGATTGGCATGAGCTTGAGATCAACAGTTGGGAAGTTAACTGTGACTGGAAATGGCACACAGTGGGTGGCTGATTTTTCAAACGTTTTGCTATTCCCAAATAGGATTAGCAATTTTCAGTACTCATTTTATGCACAAGGGGAGCCAAAGTTTTTGGCACATTCGGTCACCAATGTGACTAATAATGTTATAGTTGTGGAAAGTGAGAAATCAGCTCAAGGGGTTGTTTCCTTCTTCGTTGAACAATGA 1410 0.4319 MLERESAGYNILLTGESLSIPIARANADADADVVTTTAQDHYLPVSFNQAISATMPFFTAIFAFLITCKKETGVVFGIVVTGNSEAEKTSPPLSLARWRRRRPWVSCILCKLTYFIKLTSILRSVKGGTLRASDSFPTGRHLVELWAPNSQKLPKTSVLNSIKLQQPNGIYYEDITFRDILFDSSYKGGGIFIVDSVRTRINNCFFLHFTTEGILVQGGHETFITSSFLGQHSTVGGDPGERDFSGTAIDLASNDNAITDVAIFSAAIGIVLRGQANMLTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGDANIVLKSIKGQVSGLNIVNNMFTGNPNNKVPIVTLDGQFSNIDQVAIDRNNVIGMSLRSTVGKLTVTGNGTQWVADFSNVLLFPNRISNFQYSFYAQGEPKFLAHSVTNVTNNVIVVESEKSAQGVVSFFVEQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01473 469 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 124 469 - -
Gma15g01473 469 PANTHER POLYGALACTURONASE QRT3 124 469 IPR039279 GO:0004650
Gma15g01473 469 SUPERFAMILY Pectin lyase-like 171 426 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01473 Gma-Chr15 13365016 13370353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01473 32 85 Organic Solute Cotransporters AT1G12500 54.839 4.03e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01473 - - gmx:100802482 679.863