Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01471 ATGGCCTCAAACTCCATGGCTGGCTTGATCACCAGTTCGAATTCTCATTTCTCGCGTGACTCCAATGAGCATCAGGCTCCTCCTACCCGGCAAGCTTCGTCGAAAACTACGTGTCGAGTTTGTGGCGATGAGATTGGATACATGGAAAATGGGGAGCTGTTTGTGGCTTGTCATGTGTGTAGATTTCCTGTTTGTCGACCGTGTTATGAATATGAGAGGAGTGAAGGGAACCAGAGCTGTCCACAATGCAACACTCGCTATAAGCGCCACAAAGGTTGTCCCAGAGTGGCTGGAGATGAAGAGGACAACATTGATGCAGATGATTTTGATGATCAGTTTCCGGTTGAGAATCATCGTGAAGATCTAGATGGGCAACATGATGTTAATCATGTGGAAAATGGGGACTACAATCAAGAGAAGTTGCATCCCAGTGGTCAAGCTTTCTCTTCAGCTGGGAGTGTTGCGGGCAAGGATTTCGAAGGGGACAAAGATTTCTACAGCAATGCAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAGAGAGGTCTTCTAAACAAAGAAGATGGAAAAGAAGACCAAGCAGAAGAAGATGATTACCTTTTGGCTGAAGCTAGACAACCATTGTGGCGCAAGGTTCCGATATCTTCAAGCTTAATCAATCCATATCGCATTGTGATTGTGATGAGGCTGGTCATCCTTTGTTTCTTCTTCCGATTCCGTATCTTAACTCCAGCAAATGATGCATATCCCTTGTGGCTAATCTCTGTGATATGTGAGATATGGTTTGCACTGTCATGGATTCTTGATCAGTTCCCCAAGTGGTTCCCCATCGCACGCGAGACTTACTTGGACCGTTTGGCCTTGAGGTTTGAGCGTGAAGGGGAGACAAACCAACTAGCTCCAGTTGATTTCTTTGTGAGTACAGTGGACCCTTTGAAGGAACCTCCCATTATAACAGCCAACACTGTCCTTTCAATCCTCTCTGTTGACTATCCCGTTGACAAAGTCAGCTGCTATGTCTCAGATGATGGTGCATCTATGCTTCTGTTTGATTCCTTGGCAGAAACCGCTGAATTTGCAAGAAGATGGGTTCCCTTTTGCAAGAAGTATAACATAGAGCCAAGGGCTCCTGAGTTTTACTTTTCTCAGAAAATTGATTACTTGAAGGACAAGGTGCAGCCTACATTTGTGAAGGAAAGAAGGGCAATGAAGcgggaatatgaagaatttaaggtgaaaattaattctttggtggcaaaggctcagaagaaacctgaggaggggtgggtgatgcaggatggaactccatggccagggaacaacactcgtgatcatccaggaatgattcagGTATATTTAGGAAGTGCCggtgcgctggacgtggaaggcaaggaacttcctaaacttgtctatatttcacgtgaaaaacgtcccggctatcctcaccacaagaaagcaggtgccatgaatgctttggttcgagtttctgctgtgcttacaaatgcaccattcatgttgaatctggattgtgatcactacgtcaataacagcaaggcagtaagagaggccatgtgctttttaatggaccccaacctagggaagaagctgtgttatgtccaatttccacaaagatttgatggtattgatcgccacgatagatatgctaaccgaaacacagtgttctttgatatcaatatgaaagggcttgatgggattcaaggtccagtatatgttggtactggaactgtgttcaacaggcaggcattgtatggctatgatccaccagtatctgagaaaaggccaaagatgacatgtgactgttggccatcatggtgttgctgctgctgtggtggttcaaggaagTCCAAGTCAAAAAAGAAATCAGGAAAAGGTCTCTTCAGTGTGTTCTCCAAGAACAAGAACAAGAAGAAAATGATGGGGAAAGACTATGTTAGAAAAGGGTCAGGGTCCATGTTTGATCTTGAAGAGATTGAAGAAGGGCTAGAAGGGTATGAGGATCTAgagaaatcatccctcatgtcccagaaaagttttgagaagcgatttgggcagtcaccagttttcattgcttccacCTTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATAGCCAATCATTGGTCAAGGAGGCCATTCATGTTATAAGCTGTGGCTACGAAGAGAAGACTGAATGGGGCAAAGAGATTGGGTGGATTTACGGCTCAGTCACAGAAGATATTTTGACTGGATTCAAGATGCACTGCAGAGGGTGGAAATCAGTATATTGCATGCCAAAGAGAGCAGCATTCAAGGGATCTGCCCCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCCGTCGAGATTTTCCTTAGTCGCCATTGCCCCTTGTGGTATGGCTATGGAGGAAAACTTAAGTACCTACAGAGGATGGCTTACACTAACACCATTGTTTATCCATGGACTTCCATCCCTCTGCTTGCATACTGCACAATTCCAGCTGTGTGTCTCCTGACTGGAAAGTTCATCATCCCCACACTGAACAACCTTGCTAGCATTTGGTTTATGGCTCTATTTATCTCCATCATTTTAACAAGCGTGCTTGAGCTCCGATGGAGTGGTGTTACCATCGAAGCTCTATGGCGTAACGAGCAATTCTGGGTCATTGGAGGTGTTTCTGCTCACCTTTTTGCTGTATTCCAAGGCCTCCTCAAAGTTCTTGGTGGAGTAGACACCAACTTCACTGTCACAGCAAAAGCAGCAGAGGACACTGAATTTGGAGAGCTCTATCTCTTCAAGTGGACCACTCTTCTCATCCCTCCAACCACTCTCATAATCTTGAACATCGTTGGAGTCGTGGCCGGAGTCTCTGATGCCATCAACAATGGATATGGCTCATGGGGACCTTTGTTTGGGAAGCTGTTCTTTGCCTTTTGGGTCATTGTTCACTTGTACCCTTTCCTCAAAGGTCTCATGGGAAAGCAAAACAGGACTCCTACCATTGTAGTTCTGTGGTCAATTCTTCTAGCATCTATTTTCTCATTGATTTGGGTCAGGATTGATCCCTTCTTGCCCAAGCAAACTGGTCCAGTGCTCAAACAATGTGGGGTGGAATGCTAA 3153 0.3492 MASNSMAGLITSSNSHFSRDSNEHQAPPTRQASSKTTCRVCGDEIGYMENGELFVACHVCRFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRVAGDEEDNIDADDFDDQFPVENHREDLDGQHDVNHVENGDYNQEKLHPSGQAFSSAGSVAGKDFEGDKDFYSNAEWQERVEKWKVRQEKRGLLNKEDGKEDQAEEDDYLLAEARQPLWRKVPISSSLINPYRIVIVMRLVILCFFFRFRILTPANDAYPLWLISVICEIWFALSWILDQFPKWFPIARETYLDRLALRFEREGETNQLAPVDFFVSTVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVKINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPNLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKSGKGLFSVFSKNKNKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLQRMAYTNTIVYPWTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01471 1050 SUPERFAMILY Nucleotide-diphospho-sugar transferases 319 867 IPR029044 -
Gma15g01471 1050 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 164 1050 - -
Gma15g01471 1050 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 25 122 - -
Gma15g01471 1050 Pfam Zinc-binding RING-finger 32 103 IPR027934 -
Gma15g01471 1050 SUPERFAMILY RING/U-box 26 103 - -
Gma15g01471 1050 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 420 598 IPR029044 -
Gma15g01471 1050 Pfam Cellulose synthase 306 1043 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma15g01471 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 112 IPR013083 -
Gma15g01471 1050 Coils Coil 404 424 - -
Gma15g01471 1050 MobiDBLite consensus disorder prediction 1 33 - -
Gma15g01471 1050 CDD mRING-HC-C4C4_CesA_plant 37 86 - -
Gma15g01471 1050 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 164 1050 - -
Gma15g01471 1050 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 25 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01471 Gma-Chr15 13353490 13359691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01471 37 1050 Glycosyltransferase AT5G05170 65.981 0.0 1426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01471 K10999 - gmx:100801955 2091.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01471 15 13353490 13359691 Gma09g00464 09 4539164 4546298 GST