Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01460 ATGTGTTTCATTCACCGCCGCATTTTGTTCTTGTTGTTGCTCTTTCAACAGGAAACTCCTCCTTCAACAGATTATGAGTGCGGTTCATTACTCTTGAAGCAAGGTTTGGTGGGGGGGAATAAGATCATGCCTGGCATTCTCTCAAGGCTGAATGCAACCATTTACTGTCGCATTCGGGAAGCAATAACAAGGCAACAAGGAGTGCCGACATCCTTGTACAGAAgtcgtggtagtgtgcgagacttcacaaagcctgctgtagCTGATACTTACTTATCCTCTCCGCCTCCCCTTTCTTCCATCTCTCACCGGCAATCTCCCCATTCTCAATTTCACTGCTCCGTGACATCATCACCGGCATCTCCGGCGGCACAAACTCTCCATTCTCCAGCTCACACCCCAAGTGACGTTATTCTCCCTTTCACTCACTCACTCGCTCCCAAACCTCGTACGCCGTACCGTGTTTCCTCGTCCGACCAACAAACCTCACGCTCTGGTGTGGTTTTCTCCGATTCTGCAGTAGCGGCACACATGCCACAACCAAAAGAGCTTCCAGGGTTTTATTATGACCCTGAGAAGAACAGGTATTTTCCCATCAAAGGCCCCATTCCTGGCTCTTCTTCTAAGCCCAAGACCCCTGCTCTTAACTCACCCCAAACCTCTTCCAATCAGGAAAGTGGTGGGAGTTGTTGTAGGAAGCTTAGAAACAGAACCCTGTCTAAGCTGCTTCAGGCTAGGGAGTTGGATGGTCACAGTGTCGTCATCTCTCGGTATTGCAGAAGTAACTTCACTGAGGAATTCCGGAAAATGCAAGCATCTAGACCTGTGGTCTGGAAATATCGGGGAACTGATGGGATGCGTATTACTGCTTTGGAACACTTGCGCGTTGATGTGCAGACATCCGAGGGGCAAACTGAAACTGATGTTTTGTTGACGGGCAGCACAAATGGCTCGATGAGTTTTTCTCAAGTTGGAGGGGTTGGGCGTAATTATGATGGTGGGACAAAATGGAGGGCAGATTGTGTGAAGAATTATGTTAAAGGGAGAACAGATGAGCATAATGAGGTGCTTAAGCCGGTTTTCAAACCTAATCGAGCTGCACTGCTTATGTCCTCTAGAATATCTAGTATAAGATTGGGTCCTAAGTGCTCTTCTCACGCTGTCAATGATGGTCATATTGTTGGACGTGCATTATTTACTACTTTGGGATCAGAGACATCAGGTGGATCAGTTTATACTCTTGATCTTGTTGAACCATTAAATCTTGGACCAGGTATACTGAACACATGGAGCGGACTAGAGGAAATTGCTTCTTTCAGGTGTACCATTTGGACAGCAGAATATGATTATAATAGACATCGGGCTGTAATTGGTACAAATTTGGGAGGTGCTTCAGTGGATCTGGAAACTGGGACGATATCATGGTTTTTACATTGTAAAAGTGATGTTTTTGCGCAACAGATTGTTAGTTCAGGAAATGTGATTTTATGTGGGCTAAGAAATGGAGCAATTGTCACTGTAGATTCTCGTGAGAGTCGAGAAAGCCTTTCTGGTAGACTTATTACCCATCGGATACCATATACATCTTCAGACAAGAAAGTTGGAGGTTCTAATAAAGAATGGTTCAAGCTCAAAGGAGACATATATCCTTCTCATACCATTAGGATGCCTTCATCTATTTCCTGTTTGGCGTCACTTCAGTTTGATGATCAGTACTTTTTGGCAAGCTCAATGGATGGATCGATGAGACTTTATGATCTTCGTCTACTTCAGAGGGGTGCTGTTCAATGTTATGAAGGGCATGTGAATTCTCATACCCGTATACAGATTGGTGTTGATCCATCTGAGAGATTTGTTATGTCAGGTGGAGAGGATTGCAAGCTAAGGTTATGGAGTATCAAGTCTGGTGAACTGCTTTTTGAGGACAAGTTCTCTGATTCAGTTATCTCCACTGTGTGCTATAAAACATATGGACATAGTTTTAAAGCAGAAGAGGAAAACCAATACAAGCGTGACTCGTCTCAGGGTGCATGGCTTGGATCACTTGAAGGACTGTTTTATATGTGCTGGTTATGA 2076 0.4359 MCFIHRRILFLLLLFQQETPPSTDYECGSLLLKQGLVGGNKIMPGILSRLNATIYCRIREAITRQQGVPTSLYRSRGSVRDFTKPAVADTYLSSPPPLSSISHRQSPHSQFHCSVTSSPASPAAQTLHSPAHTPSDVILPFTHSLAPKPRTPYRVSSSDQQTSRSGVVFSDSAVAAHMPQPKELPGFYYDPEKNRYFPIKGPIPGSSSKPKTPALNSPQTSSNQESGGSCCRKLRNRTLSKLLQARELDGHSVVISRYCRSNFTEEFRKMQASRPVVWKYRGTDGMRITALEHLRVDVQTSEGQTETDVLLTGSTNGSMSFSQVGGVGRNYDGGTKWRADCVKNYVKGRTDEHNEVLKPVFKPNRAALLMSSRISSIRLGPKCSSHAVNDGHIVGRALFTTLGSETSGGSVYTLDLVEPLNLGPGILNTWSGLEEIASFRCTIWTAEYDYNRHRAVIGTNLGGASVDLETGTISWFLHCKSDVFAQQIVSSGNVILCGLRNGAIVTVDSRESRESLSGRLITHRIPYTSSDKKVGGSNKEWFKLKGDIYPSHTIRMPSSISCLASLQFDDQYFLASSMDGSMRLYDLRLLQRGAVQCYEGHVNSHTRIQIGVDPSERFVMSGGEDCKLRLWSIKSGELLFEDKFSDSVISTVCYKTYGHSFKAEEENQYKRDSSQGAWLGSLEGLFYMCWL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01460 691 Pfam WD domain, G-beta repeat 596 632 IPR001680 GO:0005515
Gma15g01460 691 SMART WD40_4 591 632 IPR001680 GO:0005515
Gma15g01460 691 SMART WD40_4 547 586 IPR001680 GO:0005515
Gma15g01460 691 MobiDBLite consensus disorder prediction 209 231 - -
Gma15g01460 691 ProSiteProfiles Trp-Asp (WD) repeats profile. 610 641 IPR001680 GO:0005515
Gma15g01460 691 MobiDBLite consensus disorder prediction 96 133 - -
Gma15g01460 691 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 189 689 - -
Gma15g01460 691 MobiDBLite consensus disorder prediction 96 132 - -
Gma15g01460 691 MobiDBLite consensus disorder prediction 198 231 - -
Gma15g01460 691 PANTHER KATANIN P80 SUBUNIT 189 689 - -
Gma15g01460 691 Gene3D - 466 660 IPR015943 GO:0005515
Gma15g01460 691 SUPERFAMILY WD40 repeat-like 409 653 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01460 Gma-Chr15 13217646 13231846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01460 571 661 Miscellaneous Gene Families AT5G08390 27.473 7.20e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01460 K11799 - gmx:100798753 1038.48