Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01443 ATGGATCCAACATTAGATGTATCTACTCCAAGTCCTAATGTCATAGAGGAGGATTTGAACTCTTTTTGGCAATCTATCTATGAAAATTCCAACAAAGTCCAAAAGCTTGAGGAGCAAGTTGCCGAGGTTCAAAAGTTCTACAGTACCATTAATGATCAAGTTAATGATGCCAAAGACAAAGGGCGGGAGAAGCACGTTATTGGCACCAAAAGGTCACAGCAAGGTGGATCAAGTAGGGAAGCTAATTCTTCAAACACAATGAAAGAGGTTATGCACCAGTTTTCCATAATATTTCATCAGGCAAGTGCAAATACCTTGCAACTATTTTTTATAACTCATCAAAGATGGGCTTGGCCCTTCATGGAACCTGTAGATGTTGAAGGTCTTGGGCTGCATGACTATTATCAGATTATCGAAAAGCCTATGGATTTCGGAACGATAAAAAGGAAAATGAATGCTAAGGATGGTTCTGGTTATAAGAACGTGCGTGAGATATATTCTGATGTCAGGTTGGTTTTTGAGAATGCAATGAAATACAACGGTGAAAAAAATGATGTCCACATTATGGCGAAGACATTGCTGGAAAAATTTGAGAAGAAATGGCTGCAGCTATTACCTAAAGTTGCTCAGGCGGAAAGAGAAAAGGAAGAAGCACGTGTGCTGTTGGAAGCGAAGCGTGCTCAAGAAGCTACTTATGCCAAAATGACAAAGGATATAAGACATGCGCTGTGCGATGTTGATGAGCAGTTAAAGAATCTCAAAGAAATGGTGATTAAAAAGTGCAGGAAACTATCAACTCATGAGAAACTGGCACTTAAGAAAAATTTAAGCAGACTGAATGGTGGCAATCTCCTCAAGGCAATGAGCATAATTCATGAGATTGACCCAACCTTCCAACATGATGCTCCACAGGTCGACCTTGACCTTGATCGTCAGAGTGACTTCATACTGTGGAAACTAAACCTTTTTACCAAAGAAGCACTGGAAGATCAAGACAAAGCTGCTGCTGAGGAGATGGCTGTTAACCACAACGTTAACACTGAGGACCAGAAAAACACCAACAAAAGGAGGAAACTGTGA 1080 0.4046 MDPTLDVSTPSPNVIEEDLNSFWQSIYENSNKVQKLEEQVAEVQKFYSTINDQVNDAKDKGREKHVIGTKRSQQGGSSREANSSNTMKEVMHQFSIIFHQASANTLQLFFITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAKDGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQLLPKVAQAEREKEEARVLLEAKRAQEATYAKMTKDIRHALCDVDEQLKNLKEMVIKKCRKLSTHEKLALKKNLSRLNGGNLLKAMSIIHEIDPTFQHDAPQVDLDLDRQSDFILWKLNLFTKEALEDQDKAAAEEMAVNHNVNTEDQKNTNKRRKL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01443 359 Coils Coil 33 53 - -
Gma15g01443 359 MobiDBLite consensus disorder prediction 70 85 - -
Gma15g01443 359 ProSiteProfiles NET domain profile. 254 335 IPR027353 -
Gma15g01443 359 Gene3D - 54 226 IPR036427 GO:0005515
Gma15g01443 359 Pfam Bromodomain 117 191 IPR001487 GO:0005515
Gma15g01443 359 Coils Coil 208 231 - -
Gma15g01443 359 PANTHER OSJNBA0053K19.4 PROTEIN 5 358 - -
Gma15g01443 359 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 5 358 IPR017413 GO:0005634|GO:0006355
Gma15g01443 359 Gene3D - 258 334 IPR038336 -
Gma15g01443 359 SMART bromo_6 96 206 IPR001487 GO:0005515
Gma15g01443 359 Pfam Bromodomain extra-terminal - transcription regulation 263 324 IPR027353 -
Gma15g01443 359 PRINTS Bromodomain signature 115 128 IPR001487 GO:0005515
Gma15g01443 359 PRINTS Bromodomain signature 168 187 IPR001487 GO:0005515
Gma15g01443 359 PRINTS Bromodomain signature 131 147 IPR001487 GO:0005515
Gma15g01443 359 SUPERFAMILY Bromodomain 112 208 IPR036427 GO:0005515
Gma15g01443 359 MobiDBLite consensus disorder prediction 57 85 - -
Gma15g01443 359 ProSiteProfiles Bromodomain profile. 112 187 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01443 Gma-Chr15 13039195 13047076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01443 - - gmx:100795037 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01443 15 13039195 13047076 Gma09g00434 09 4133173 4136614 GST