Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01309 ATGCAGAGTTCCACCCCTGCTGCGAGAAACAGCAAGAACAAGTTTATTACTGCTAAGAACGTGAAGAGCCTCGTCAACACCATCGTGATTCCTTCCATTTCATCCACTCCACTCGAGTCTCTCCACAGAGGCAACTGGCCCAAGCTCATTTGTGTTGACTGCATTGACTGTGCTGCTGATGCATCGTTTGTTAGTGCTGTGAATGAAGGAATTGAAGCTGCTAAAGATATTGTATGCCTTAGAAGGCCCTGGGTGATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGTAAGGCCGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGACCTTGTGAAAATGTGTGCCCTGCAAATGCCATAACATTCCAAGGGAAATCTACTTCAGGAATTTCACATAATACTGAAGCACCTAGAGTACTGAAGGTGCAGCAATGTTCAATTGGCTTGAAAATGCAGGACGGAGTCATAACAGAAAGCTGCTATGGTTGTGGTCGCTGTCTTCCGGTTTGCCCCTACAATAAAATAAGAGAGGTAACATATGCAAGAGATGCTATTACAACTGCTGCTCTCATCAAGAGAAATTGTGTTGATGCTATGGAGATACATACAAGTGGGAGTGATTCTTCTATAGACAGCAAAGAACTCTGGAGTGCTCTAGGAGATTCAGTAGTATATTTGAAGCTTATAGCTGTAAGTGCCTCTTGGCATTTGAGTGAAGAATTTATTCTTGAAATAATCCGGGTTAGCTTACCTAATGGTGGTTTTCTTCACACAATTGATGGGCTGAAAAAAGAGGGACTCTTCCAAACAACTACTGATTGTTGGTAG 840 0.4274 MQSSTPAARNSKNKFITAKNVKSLVNTIVIPSISSTPLESLHRGNWPKLICVDCIDCAADASFVSAVNEGIEAAKDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAITFQGKSTSGISHNTEAPRVLKVQQCSIGLKMQDGVITESCYGCGRCLPVCPYNKIREVTYARDAITTAALIKRNCVDAMEIHTSGSDSSIDSKELWSALGDSVVYLKLIAVSASWHLSEEFILEIIRVSLPNGGFLHTIDGLKKEGLFQTTTDCW 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01309 279 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 155 184 IPR017896 -
Gma15g01309 279 SUPERFAMILY 4Fe-4S ferredoxins 88 188 - -
Gma15g01309 279 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER 19 181 - -
Gma15g01309 279 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 19 181 - -
Gma15g01309 279 Pfam Iron-Sulfur binding protein C terminal 194 238 IPR021039 -
Gma15g01309 279 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 98 129 IPR017896 -
Gma15g01309 279 Gene3D - 110 200 - -
Gma15g01309 279 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 164 175 IPR017900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01309 Gma-Chr15 11627294 11633272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01309 - - gmx:100804088 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01309 15 11627294 11633272 Gma15g01309 15 11627294 11633272 ECH
Gma15g01309 15 11627294 11633272 Gma09g00321 09 3013205 3018011 GST