Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00098 ATGAGTCGGAGGGAGATGAGCTCAGGTTCGGGTTGGTTGGCGGGAAAGTTGGCGAAAATAGTGAAAGCCGGAGAGGCTGTTCTGCACTCGCGAGCCGAAGAAGTTGAGGCCATTGAAATCAAGTCAGAGAGAGTGCAGAAGATCATCGACGACATGGTCCGCGTTATGAGAAAAGCACCTGGAGTTGGCCTCGCTGCCCCACAGATTGGAATCCCCTTAAGGATTATTGTTTTGGAAGACAAAATCCAATATATGGCTTATTTTTCAAACCAAGAGCTCAAGGCACAAGATAGAACACCTTTTGATCTTTTGGTCATCCTCAATCCCAAGCTAAAGAACACCACCACCAGGACTGCCCTATTCTTTGAAGGCTGCTTGAGTGTTCCTGGATATAGTGCTGTGGTAGAGCGGTACCTTGATGTTGAGGTTGCAGGTTTTGATCGTTACGGTGAACCCATCAAAATAAATGCAACTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACCTGGATGGAACACTGTATGTTGATAAGATGGTACCTAGAACTTTCAGAGCTTCAGAAAACAGTTATAAGCCTCTTGCCCATGGGTGCCCCAAACTTGGCCCTCGCTAA 621 0.4718 MSRREMSSGSGWLAGKLAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGVGLAAPQIGIPLRIIVLEDKIQYMAYFSNQELKAQDRTPFDLLVILNPKLKNTTTRTALFFEGCLSVPGYSAVVERYLDVEVAGFDRYGEPIKINATGWQARILQHECDHLDGTLYVDKMVPRTFRASENSYKPLAHGCPKLGPR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00098 206 PANTHER PEPTIDE DEFORMYLASE 16 206 IPR023635 GO:0042586
Gma15g00098 206 Hamap Peptide deformylase [def]. 16 196 IPR023635 GO:0042586
Gma15g00098 206 Pfam Polypeptide deformylase 18 184 IPR023635 GO:0042586
Gma15g00098 206 Gene3D Peptide deformylase 16 205 IPR036821 -
Gma15g00098 206 PANTHER PEPTIDE DEFORMYLASE 16 206 - -
Gma15g00098 206 TIGRFAM pept_deformyl: peptide deformylase 18 185 IPR023635 GO:0042586
Gma15g00098 206 CDD Pep_deformylase 20 177 IPR023635 GO:0042586
Gma15g00098 206 PRINTS Peptide deformylase signature 50 79 IPR023635 GO:0042586
Gma15g00098 206 PRINTS Peptide deformylase signature 154 183 IPR023635 GO:0042586
Gma15g00098 206 PRINTS Peptide deformylase signature 135 153 IPR023635 GO:0042586
Gma15g00098 206 PRINTS Peptide deformylase signature 123 134 IPR023635 GO:0042586
Gma15g00098 206 SUPERFAMILY Peptide deformylase 17 191 IPR036821 -
Gma15g00098 206 PIRSF Pep_def 6 203 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00098 Gma-Chr15 767946 769801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00098 K01462 - gmx:100306710 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00098 15 767946 769801 Gma15g00098 15 767946 769801 ECH
Gma15g00098 15 767946 769801 Gma08g01931 08 17335224 17338216 PCT
Gma08g01931 08 17335224 17338216 Gma15g00098 15 767946 769801 PCT