LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma14g02143	ATGACTCTTGAAGATTTCTTTACGTTGACTGAAATGAAAGATGGCCTCACAGCCCCTTCTCGAGTGCAAGAGTTGGTCTCTGTAATGAAGAAGGAGCAAGATTGTGTTGTTAAGAATGCTGGTGATGCAACAAGGCAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTGATCTTTTTATTCAATTAGATGGACTTGGGTTCATCAACAAATGGTTAAAGGATGCCCAAAATTTGGGTGCTGATAATACTAATGATGGCTTCATTGAAGAGTCAATTACTGCAATGTTACGAGCAGTTGAAAAACTGTATCTAGACAGCGAGAAGTCAATTTCATCAGGAATTTCGGTAACTGTCAGTAACCTTCTTGGCCATCATAGCTCTAAGGTGCAGGATAAAGCAAGAGTATTATTTGACCGCTGGAAAGGAGGTGGAGATGGAGATGCTGAACCAACTGATAATTCGGATCTTGGTAGAATCAACAATGTGAGTGATGAGATTGTTTGGGAGAAAGGCCAGCCATCTTCTGTGAATGAAGCTGGCAATGAAGATGATCATGCATCTCAACCTGCTGGAGGTGAGAAGTCTCTATTGGGAGGCTCAGATAGTCAGCTACAAGAAAAAGTTTCTAGCATACAGATACAGAATGCTGACAATGCACTCCAGTCCTCTGTAAGTTTGGATTGTGAAGATGCCAAAGAGAGATCAAACCATGTTGATATTGTCTTGGCTTCTGTTCAAGAAGTTGCCAACATAAGTGAAGGTGGGACCTGTAACTTATCTGTTAATAAACAAGGCAGTTTCAAAGGTCAACAAGATGATTTGAAGTTAAATGACTTGTCCAAAAACGAGAAGCAAGATCAAAATGTTAATGGTTCTCCAGAAGAATTAAGAGCATCAGATATCTCTTCAGCATCTGGAGAGCCAGATCTTGAACCTGTCTCCATTGGTGATAGTGAAGCAAAAGCACTGGAGTCTGTGGAAGAAGAACCTGCTTTAGAACATAATGTTGAAAGCAATGAAAATATCATTTGTCCTAAAATAAATGTTTCTGGTAGCATGAGAACACCTGCATCAGATGGGATGAGTGTGGGGGATGATGTCAGAGCTATAAATTCCAGCAATCCCCAACTTCCCAAATCATCAGAAAATGATGATTGTTGTTCTCAAGCATTGCAGGACTTATCAGTCACTGGCAGTCACTTGGAAAAGCCTGAGATGTCTTACCTCAAAACAGAATATGTAGGAGCAGTAAAGGAAAGCAAGGGCCAAGATGATGATACCCCAAATGGTTCTGACTCTTCTAATCAGGGCAAAGGTCCCACAAGCCCTAACATTATTGACAAGAATTCTGACATGGAACTTGAGTATGGTATTGTTGATGCTTTAGAAGTTGCTCGACTAGTTGCCCAGGAAGTTGAGAGGGAATGTGTAAGCCCTATAAAGGAAGGGAATGACCAAGTTTCTAATGAAGTCAACAGTACCACAAATGGTTCTGATTCTTTTAAATGGGGAAATGGCCCCAAAAGCCCTAATGTTATTGACAAGAGTTCTGATATTGAACTTGAGTATGGTATTGTTGATGCTTTAGAAGTTGCCCGGCAAGTTGCTCAGGAGGTTGAGAAAGAAGTTTGCAGCTCTTCTTCAGATAAAATCTCAGAAGGTGGAATCAGGCAGGCAGCCAGCCTTGATTTAGGGAGAAAGGATGAAGTCACTCATGCCCTACCTGAGGAGGTATCATCCAGGCAAAGCAACTCTGCTGAGGTGTGTTCTGAACAGGCGGAACATATGAGTGTTTCAGATAATATTGAGGCTGGGCAAGATGACTTGGAGTCCTCGCAGGTGACTGAAGCAGCTCGAGACCCAGGAGGTAATTCAGAGAAAAGTCTCTGTACCTTTGATCTCAATGAAGAAGTTGGTTCTGATGATATGGATGTTTCTGTAAATGCTATGTCTACTATGCCAATACCTGTTGTTTCTGCTTCAAAACCTGCACAGACTTCTCGGTTGCCAATGGCCCCTTTGCAGTTTGAGGGGACCCTTGGATGGAAAGGGTCAGCTGCCACCAGTGCCTTTCGCCCCGCATCACCTCGTAAAAATTCTGATAACGAGAAGAATGTTTCTGTTGGTGGAAACTCAGAGATTTCCAAGCAGAAGCATGATTGCTTTGATTTTGATCTGAATGTGGCTGAGGATGAAGAAGGATTGGTAAAACAAATTGGTGAATCTTCAGGCCTTCCTTCTGGCCAATCATCAGTTGAACTTGGTCCTAAAAGATCAAGCAGGTTTGAGTTGGATTTAAACAGTATTGGTGCTGATGATGATGCCCAACCTTCAGATCAGAGGATGGAGGGGGCACTCTTTTCAGGAAGAAATGGTTATTGGAGCCCATCACCTGCTTCATCGTCGTCATCAATGCAACCTTTAGTACGAAACATCGATTTGAATGACAGACCATTCTTTCAAACCGATTTAGTGGACCAAGGGCATAGTAAGTCTTCTTCGATTATTGAAGCGTATAAACGGTCCAAGTCGGATGCTCCCGTGATATCTATATTGGGTGCCAAGGTAGAAGTTGGTAGAAGAGAATATATTCCTCAAACTTTATCTTTGCCAAATGGCAAGGCAATTGAGCCTGCAATGGATCTTCCATTGTCAGGAGCAGGTAGCATTTTAGGAATGGGCCCTACACTACCCTACAATCATTCAACTGCTTTTGGGTATAACAGACTGACATCAGTGCCTGCTTTGTCTTTTTCATCAGCCATGTATGGATCATCTGGTGGCCCAATTCCATACATGGTAGACTCAAGAGGAACTCCTGTTGTGCCTCAGGTTGAGGGATCTTCCTCAACTGTCCTGTCATCTTATTCTCAACCTCCATTTATCGTGAGCATGACCGGTACACAACTTGGTTTAAATGGGGTTGGATCTTCACGTCCCAACTTTGATTTGAACTCTGGCTTCACAATTGATGGAGGGAACAGAGACATGTTGACTGCAAGACAATTTTTCTTTCCTGCTCAAGGCAGAGCCATGGAGGAGCACGTGAGAACCCTTCCACAATCCTCAAGTTCCGGAGTTAGTGTGAAAAGAAAGGAACCAGATGGTGGCTGGGATAGGGATACCTATGCATTTAGCTACAAACATCAGCAACCTCCATAG	3183	0.4292	MTLEDFFTLTEMKDGLTAPSRVQELVSVMKKEQDCVVKNAGDATRQWAAVASTIAATENKDCLDLFIQLDGLGFINKWLKDAQNLGADNTNDGFIEESITAMLRAVEKLYLDSEKSISSGISVTVSNLLGHHSSKVQDKARVLFDRWKGGGDGDAEPTDNSDLGRINNVSDEIVWEKGQPSSVNEAGNEDDHASQPAGGEKSLLGGSDSQLQEKVSSIQIQNADNALQSSVSLDCEDAKERSNHVDIVLASVQEVANISEGGTCNLSVNKQGSFKGQQDDLKLNDLSKNEKQDQNVNGSPEELRASDISSASGEPDLEPVSIGDSEAKALESVEEEPALEHNVESNENIICPKINVSGSMRTPASDGMSVGDDVRAINSSNPQLPKSSENDDCCSQALQDLSVTGSHLEKPEMSYLKTEYVGAVKESKGQDDDTPNGSDSSNQGKGPTSPNIIDKNSDMELEYGIVDALEVARLVAQEVERECVSPIKEGNDQVSNEVNSTTNGSDSFKWGNGPKSPNVIDKSSDIELEYGIVDALEVARQVAQEVEKEVCSSSSDKISEGGIRQAASLDLGRKDEVTHALPEEVSSRQSNSAEVCSEQAEHMSVSDNIEAGQDDLESSQVTEAARDPGGNSEKSLCTFDLNEEVGSDDMDVSVNAMSTMPIPVVSASKPAQTSRLPMAPLQFEGTLGWKGSAATSAFRPASPRKNSDNEKNVSVGGNSEISKQKHDCFDFDLNVAEDEEGLVKQIGESSGLPSGQSSVELGPKRSSRFELDLNSIGADDDAQPSDQRMEGALFSGRNGYWSPSPASSSSSMQPLVRNIDLNDRPFFQTDLVDQGHSKSSSIIEAYKRSKSDAPVISILGAKVEVGRREYIPQTLSLPNGKAIEPAMDLPLSGAGSILGMGPTLPYNHSTAFGYNRLTSVPALSFSSAMYGSSGGPIPYMVDSRGTPVVPQVEGSSSTVLSSYSQPPFIVSMTGTQLGLNGVGSSRPNFDLNSGFTIDGGNRDMLTARQFFFPAQGRAMEEHVRTLPQSSSSGVSVKRKEPDGGWDRDTYAFSYKHQQPP	1060

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	694	719	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	434	455	-	-
	Gma14g02143	1060	SUPERFAMILY	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	61	160	IPR035441	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	174	189	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	613	635	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	699	719	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	425	456	-	-
	Gma14g02143	1060	Gene3D	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	17	149	IPR035441	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	290	306	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	1024	1060	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	491	516	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	289	321	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	146	214	-	-
	Gma14g02143	1060	ProSiteProfiles	TFIIS N-terminal domain profile.	73	154	IPR017923	-
	Gma14g02143	1060	PANTHER	TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED	489	1060	-	-
	Gma14g02143	1060	PANTHER	TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED	1	484	-	-
	Gma14g02143	1060	MobiDBLite	consensus disorder prediction	491	512	-	-
	Gma14g02143	1060	PANTHER	TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN	489	1060	-	-
	Gma14g02143	1060	PANTHER	TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN	1	484	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma14g02143	Gma-Chr14	52583537	52586719	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma14g02143	-		-	gmx:102669951	2082.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma14g02143	14	52583537	52586719	Gma14g02143	14	52583537	52586719	ECH