Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01679 ATGTGTAGTTCCCGAAGTGACACTGACTCACACCACACACACCAGAGACAGAGGAAAGAAGCAACTGACGGACGGTCCCTTCTAACCTATATTGAGCTTATGGGTTCTTTGTTTAGTATGGCTAATACAAAGGCCAATCAAAGTGAGTCTAGTGCAACCTCACCAAATGAGACCTCTAAGAGGCAAAGAATGTCACCTGCCTCTGTTGAAGAATGTCCAAGACTTATTCCTAATATCCCGGATGAGTTATCCCTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACTACCATGTAAGGCTGGTGTCTAGGAGGTGGAAAACAACTATAACGAGTTTGGAATTATATAAAGTAAGAAAAGAGCTTGGTACAACTGAAGAATGGCTATATCTGTTGGTTAGGATTGGACAAAATAAACTCTTATGGCATGCTCTAGACCCCCGTTCTCGAATATGGCAGAGATTGCCTATTATGCCCAGAGTTGTCGATGAAGAAGATTCCCAAAAGGTTTCTTCTAGGCTTTGGATGTGGAACATGGTCGAAGGTATCAGAATTGCTGAAATTATTAGAGGTCTGCTTGGACAGAAGGATGTATTGGATGACATGCCCTTTTGTGGTTGTGCTTTTGGAGCTGTTGATGGATGTCTTTATATTCTAGGTGGATTCTCTAAAGCTTCAACTATGAAATGTGTATGGCGATTTGATCCGATACAAAACTCATGGAAGAAGGTGAATTCTATGTCTACAGGTAGGGCATATTGTAAGACAGGTGTCTTGAATAACATGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCTGGATTGATTCCTCTTCAATCTGCTGAAGTTTTTGACCCCTTCAAGGATACATGGTCCGACGTACCTAGTATGCCATTCTCAAGAGCTGGAGTCCTGCCCACAGCTTTTTTGGCTGACATGTTAAAGCCTATTGCCACCGGGTTAAGCTCGTACAAGGGAAGGTTATATGTTCCCCAAAGTTTGTATTCATGGCCATTTTTTGTTGATGTTGGAGGAGAAATATATGATCCTGAAACAAATTCATGGATGGAAATGCCAAATGGAATGGGTGAGGGATGGCCCATTAAGCAAGCAGGAACCAAACTGAGTGTTGTAGTGAATGGTGAATTATATGCTTTTGATCCTTCAAATTCTGTGGATAGTGGAAGGATCAAGGTATATGATCAAGGAGAGGATGCATGGAAAGTTGTTATTGGAAAAGTCCCTGTATATGATTTTACGGAATTGGAGTATCCATATCTACTAGCTGGTTTCCATGGAAAGCTTCATTTCATCACAAAAGATGCCAATCATGATATTTCTGTTCTGCAGGCTGACCTGTGCAGTAATTTGGATTCTTCACAATCAACCTCGACACCTCAATCACCCAAATCCATGGAGGATGAATTGTTGCAAGAATCAACTGAAACAGATGAAGTTATTTGGAAACTAGTTGCAAGTAAGGGTTTTGGGCAGGCCGAACTTATCAATTGCCAAGTTATTGATATCTAG 1533 0.411 MCSSRSDTDSHHTHQRQRKEATDGRSLLTYIELMGSLFSMANTKANQSESSATSPNETSKRQRMSPASVEECPRLIPNIPDELSLQIIARLPRICYYHVRLVSRRWKTTITSLELYKVRKELGTTEEWLYLLVRIGQNKLLWHALDPRSRIWQRLPIMPRVVDEEDSQKVSSRLWMWNMVEGIRIAEIIRGLLGQKDVLDDMPFCGCAFGAVDGCLYILGGFSKASTMKCVWRFDPIQNSWKKVNSMSTGRAYCKTGVLNNMLYVVGGVSQGQAGLIPLQSAEVFDPFKDTWSDVPSMPFSRAGVLPTAFLADMLKPIATGLSSYKGRLYVPQSLYSWPFFVDVGGEIYDPETNSWMEMPNGMGEGWPIKQAGTKLSVVVNGELYAFDPSNSVDSGRIKVYDQGEDAWKVVIGKVPVYDFTELEYPYLLAGFHGKLHFITKDANHDISVLQADLCSNLDSSQSTSTPQSPKSMEDELLQESTETDEVIWKLVASKGFGQAELINCQVIDI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01679 510 MobiDBLite consensus disorder prediction 44 65 - -
Gma14g01679 510 SMART kelc_smart 262 312 IPR006652 GO:0005515
Gma14g01679 510 SMART kelc_smart 215 261 IPR006652 GO:0005515
Gma14g01679 510 SMART fbox_2 79 119 IPR001810 GO:0005515
Gma14g01679 510 Gene3D - 138 417 IPR015915 GO:0005515
Gma14g01679 510 SUPERFAMILY Kelch motif 130 438 IPR015915 GO:0005515
Gma14g01679 510 Pfam Kelch motif 251 299 IPR006652 GO:0005515
Gma14g01679 510 Pfam Kelch motif 203 248 IPR006652 GO:0005515
Gma14g01679 510 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 36 510 - -
Gma14g01679 510 SUPERFAMILY F-box domain 75 122 IPR036047 GO:0005515
Gma14g01679 510 Pfam F-box-like 76 116 IPR001810 GO:0005515
Gma14g01679 510 MobiDBLite consensus disorder prediction 7 22 - -
Gma14g01679 510 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 36 510 - -
Gma14g01679 510 MobiDBLite consensus disorder prediction 1 22 - -
Gma14g01679 510 MobiDBLite consensus disorder prediction 44 69 - -
Gma14g01679 510 ProSiteProfiles F-box domain profile. 73 119 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01679 Gma-Chr14 45697938 45701327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01679 79 297 Miscellaneous Gene Families AT4G33900 24.664 4.76e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01679 - - gmx:100815614 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01679 14 45697938 45701327 Gma14g01679 14 45697938 45701327 ECH