Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01586 ATGGCCACACTTCAAGcttctcttctctccaaaccttcccttctctccaaaccttccctCCCATTCCCATTCCCGTTCCTCTCTCCGAACCACTCCCCATTCTCCCTCTCCTTCCCCCCCATGCGCCGCGTCCTCTCCACACCGTTATGCTGCACCTTCTGCCCCTCCGAACCCAATCTCAGCCCCTCCGAACCGGAACACGAAGCCGGTTCAGCCAACACCGAAGAGCCGGGTATAAATTCAACCGAAGAAGGTGCAGCTTCGGTTTCAGATTCGGGTTTGGAAGAAGAAGAAGGCGCCGAGGCAGTGCTTCGGAGTGGCGCGGATTCGGAGAAGATTGTTGTTGCGAGTGGAAGGCTCTCGATAGTGGTGTTCTTTGTGGGGCTGTGGGTGAAGGCGAGGGACCGCGTGAAGAAGGCTTTTTCGGAGCTTCTCGATTGGTGGCCGTTCTGGCGCCAGGAGAAGCGCCTCGAGCGATTGGTCGCTGACGCCGACGCGAATCCCCAGGATGCCGCCAAACAGAGTGCTCTGCTTGTTGAACTCAATAAACACAGTCCTGAATCTGTCATCAAGTGGTTTGAACAAAGGGATCGAGCTGTAGACAGTAAAGGGGTTGCGGAATATCTTCGAGCTCTTGTGGTCACTAATGCTATTAGCGAATATCTTCCTGATGAGGATTCTGGAAAAGCTTCTAGCCTTCCTACCCTGTTGCAAGATTTGAAGCAGCGTGCATTGGGTAACTCAGATGAAACTTTTCTTAGCCCTGGAATATCTGACAAGCTGCCACTACATGTGGTTATGGTTGATCCAAAAGTATCAAATAAATCACGTTTTACACAAGAGCTTATCTCAACTATTTTGTTCACTGTAGCTGTGGGGTTGGTCTGGTATGAGTTTATGGGTGCTGCTGCACTTCAAAAATACATTGGAAGCTTGGGTGGGATTGGACCTTCAGGAGTTGGATCAAGTTCTTCCTATGCCCCAAAGGAGCTGAATAAGGAAGTGATGCCTGAAAAGAATGTAAAAACCTTTAAGGATGTGAAAGGTTGTGATGATGCAAAGCAAGAACTTGAGGAAGTTGTGGAGTACCTAAAAAATCCATCTAAGTTTACACGCCTTGGAGGAAAGTTGCCAAAGGGGATTCTTTTGACAGGAGCACCTGGAACTGGAAAAACTCTGCTAGCTAAGGCTATTGCTGGAGAAGCTGGTGTTCCGTTTTTCTATCGAGCAGGCTCTGAATTTGAGGAGATGTTTGTTGGAGTTGGTGCTCGACGTGTTAGATCCTTATTTCAAGCAGCCAAAAAGAAGGCTCCTTGTATTATTTTTATTGATGAAATTGATGCTGTTGGATCAACAAGAAAACAATGGGAGGGCCACACAAAGAAGACATTGCATCAGCTACTTGTTGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTGATGGCTGCAACAAACTTGCCTGATATTCTTGACCCAGCTTTAACTAGGCCTGGAAGATTTGATCGGCATATTGTTGTACCAAATCCAGATGTGCGAGGTCGGCAAGAAATATTGGAACTCTATCTGCAAGATAAACCTGTAGCTGATGATGTAGATGTTAAAGCAATTGCTCGTGGTACCTCAGGGTTTAATGGGGCAGATCTTGCGAACTTGGTAAATGTCGCTGCCATTAAAGCTGCAGTTGAAGGTGCAGAGAAAGTAACAGCTGCGCAGTTGGAGTTTGCAAAAGACAGAATAGTTATGGGTACTGAGCGGAAAACAATGTTTGTATCAGAAGAGTCAAAGAAGCTTACTGCTTATCATGAGAGCGGCCATGCAATTGTTGCCCTTAACACGGATGGTGCACATCCAATTCACAAGGCAACAATCATGCCACGTGGATCTGCTTTAGGAATGGTCACTCAGCTTCCATCAAGTGACGAGACATCAATAAGCAAGAAACAGTTGTTAGCTCGCCTTGATGTGTGTATGGGAGGAAGAGTTGCAGAAGAGCTTATCTTTGGCCAGGATTATGTCACAACTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGGTATCGAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAGCGACCAAGTTCTGAAATGCATCATACTTCTATATCTATTCTGCAGGTTGTGAAACTCCTTCGAGAAGCATATGATCGTGTGAAAGCCCTTTTGAAAAAGCATGAGAAGGCATTACATGTGCTGGCAAATGCATTATTAGAGTACGAGACACTTAGTGCAGAAGAAATCAGGAGAATACTTCTCCCATATCGGGAAGCACGGCTACCAGAACAACAGGAACAAGAAGCAGCAGAAGGGGATCTGGTGTTGGTCTCCCCTCCTTTGTGCATGGCATTCTTGTCTATGATCGCCCTTGAGCAATATTTTTTGGTGGTGTTATTCACAAACTATGGAACAGAAGCAAACGAATTGGCCATGTTGATAGCAAGGTTGTACACCGGGTGCCATGACATAATATGTCTAAGGAAGGCTTACCATGGTAATGCAACTGGGACAATGGGAGCCACAAATCACTCAAACCATTTGGAAATTTAA 2601 0.4529 MATLQASLLSKPSLLSKPSLPFPFPFLSPNHSPFSLSFPPMRRVLSTPLCCTFCPSEPNLSPSEPEHEAGSANTEEPGINSTEEGAASVSDSGLEEEEGAEAVLRSGADSEKIVVASGRLSIVVFFVGLWVKARDRVKKAFSELLDWWPFWRQEKRLERLVADADANPQDAAKQSALLVELNKHSPESVIKWFEQRDRAVDSKGVAEYLRALVVTNAISEYLPDEDSGKASSLPTLLQDLKQRALGNSDETFLSPGISDKLPLHVVMVDPKVSNKSRFTQELISTILFTVAVGLVWYEFMGAAALQKYIGSLGGIGPSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVADDVDVKAIARGTSGFNGADLANLVNVAAIKAAVEGAEKVTAAQLEFAKDRIVMGTERKTMFVSEESKKLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSSDETSISKKQLLARLDVCMGGRVAEELIFGQDYVTTGASSDLHTATELAQYMVSNCGMSDAIGPVNIKERPSSEMHHTSISILQVVKLLREAYDRVKALLKKHEKALHVLANALLEYETLSAEEIRRILLPYREARLPEQQEQEAAEGDLVLVSPPLCMAFLSMIALEQYFLVVLFTNYGTEANELAMLIARLYTGCHDIICLRKAYHGNATGTMGATNHSNHLEI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01586 866 SUPERFAMILY FtsH protease domain-like 592 772 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g01586 866 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1 115 775 - -
Gma14g01586 866 MobiDBLite consensus disorder prediction 60 103 - -
Gma14g01586 866 Gene3D Peptidase M41 585 774 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g01586 866 PANTHER METALLOPROTEASE M41 FTSH 115 775 - -
Gma14g01586 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 609 IPR027417 -
Gma14g01586 866 Gene3D - 511 584 - -
Gma14g01586 866 SUPERFAMILY PLP-dependent transferases 813 862 IPR015424 -
Gma14g01586 866 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 786 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma14g01586 866 SMART AAA_5 377 512 IPR003593 -
Gma14g01586 866 Pfam ATPase family associated with various cellular activities (AAA) 381 509 IPR003959 GO:0005524|GO:0016887
Gma14g01586 866 Gene3D - 321 510 IPR027417 -
Gma14g01586 866 CDD AAA 355 509 - -
Gma14g01586 866 Gene3D - 795 865 IPR015421 GO:0003824
Gma14g01586 866 Pfam AAA+ lid domain 532 575 IPR041569 -
Gma14g01586 866 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 332 769 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma14g01586 866 Pfam Peptidase family M41 591 768 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g01586 866 ProSitePatterns AAA-protein family signature. 480 498 IPR003960 GO:0005524|GO:0016887
Gma14g01586 866 Coils Coil 726 746 - -
Gma14g01586 866 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01586 Gma-Chr14 39423689 39460037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01586 2 792 Miscellaneous Gene Families AT5G53170 72.167 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01586 K08955 - gmx:100815980 1421.37