Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01332 ATGGGTGTTGGTTTCGCGCTAAATCCCAGGCTCAGATATTGTGTTTTATTCTTTACAAACAATATTTTTTTGTCACTAAAAAAGAGGATGGAAGAGTTATTAAACTTGCAGCTGGAGTCAGGGAAACTTGTTTCAACTCCACGAGGTTATCTTTGCCCTCAACATTTTATGAGGAGGGAGAAGTCTTACAAGATGTTACTTTCCCAGGAAAACAAAGGAAAGCGGTCACTGAGTAGTGTAAATAAAATGATTGATAATACCCAAATGCATTTTGGAGAGGTATCTACTGTTTCTATGAAGTTTGAGTCATTCAGGGCACAGCATTTTTGTTTGTTAATGGATAACCTATTTGTTTTAGAAGAAACGTTTGCTGATTATGAAGCACTGAGGTTGGAAAAGGCTATTATATTGCAACTAGAAAAGCTTGGTGCTCTTAAGTTATTCAATGTTTGTCTATCAAGATCACTTGGAACCTCACCTGTGTCAGACTATGCTGACAAAGTGAATGACTATAAGGACAAAGTTGTTGTACAGTCTAGAAAGAGAAAGGAAAATAAAACCAGAAGAGAGAATTTGTTGCCACGGCAGTTTCATCCCAGTTTCTCAGCTTCAGTTGTGAAAAGAGTGCCGAATACTAAAAATAAAAGAATAATAGTTGCTAAAAGGGAGGCAGAGATATCAAAAGGTTTAAAGGTGCTAGCAGAGTTAGAGAAAATTAGGACAGCTATAGAAGAGGATACCAAGCAAGTAGCAAGCTTGAGTAACGGGGCAGAAGCATCTGGAGTTGATGAGAAGGTGCTACAGCAGCTATTGCATCATGGCTATTATTGTCGGGATGAACTCATACAAAGTACTCATTCCTTAGTTCTATACCTTGCCAGAAAATACATGGGTATGGGAATAGCTTTGGATGATTTACTTCAGGCAGGATATGTAGGTGTTCTTCAAGGAGCTGGGAGATTTGACAGTTCAAGGGGCTACAAATTCTCAACCTATGTGCAGTACTGGATAAGGAAATCAATTTTAAGAGTGGTGGCACGATATGCTCGAGGAATTGTAATTCCTCCGTTGAACAGGGCAATAAATCAGATCCAGAAAGCTCGAAAAGCCATGAAATGCATGCACAAGAAATGCCCAGATGATTATGAAATTGCAAAGATGACAGGTCTTTCACTGGATAAAATCAAATCAGCTAGCAATTGTCTGAGAATAGTTGCTTCACTTGATCAGAAGGTGGGGAACCACCTTGGTGTAGAATATATGAAGAAATAA 1272 0.3868 MGVGFALNPRLRYCVLFFTNNIFLSLKKRMEELLNLQLESGKLVSTPRGYLCPQHFMRREKSYKMLLSQENKGKRSLSSVNKMIDNTQMHFGEVSTVSMKFESFRAQHFCLLMDNLFVLEETFADYEALRLEKAIILQLEKLGALKLFNVCLSRSLGTSPVSDYADKVNDYKDKVVVQSRKRKENKTRRENLLPRQFHPSFSASVVKRVPNTKNKRIIVAKREAEISKGLKVLAELEKIRTAIEEDTKQVASLSNGAEASGVDEKVLQQLLHHGYYCRDELIQSTHSLVLYLARKYMGMGIALDDLLQAGYVGVLQGAGRFDSSRGYKFSTYVQYWIRKSILRVVARYARGIVIPPLNRAINQIQKARKAMKCMHKKCPDDYEIAKMTGLSLDKIKSASNCLRIVASLDQKVGNHLGVEYMKK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01332 423 Gene3D - 160 350 - -
Gma14g01332 423 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 359 415 IPR013324 -
Gma14g01332 423 Coils Coil 357 377 - -
Gma14g01332 423 Pfam Sigma-70 region 2 281 349 IPR007627 GO:0003700|GO:0006352|GO:0006355
Gma14g01332 423 PANTHER RNA POLYMERASE SIGMA FACTOR SIGC 65 421 - -
Gma14g01332 423 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 65 421 - -
Gma14g01332 423 TIGRFAM sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 278 350 IPR014284 GO:0003700|GO:0006352|GO:0006355
Gma14g01332 423 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 220 350 IPR013325 GO:0003700|GO:0006352|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01332 Gma-Chr14 26813771 26818131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01332 K03093 - gmx:100802522 566.614