Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01304 ATGGGGAAACCTGGCAATGATGATACTGATTGTGGAACTAGAAGTAGAAAGCAATCAGGAAATAACAACATGAAGAAAGGGTTGTTTCACTCAGAATTTGACAAGGGGAATCATTTTGATGGCAAGAATCACATGAATGAAATTACTAAGGCCACAAATTCAGGCAGTCAACCCAGCTGCACTTTCTGCATGGGTAAAAATGATTGCCAAATCGTACGCTCAAGAACAAAAGTAATGAATATTCTGATCAAGAGTGGAAAACCTCAGGAAGCTATAGTCATTTTTCAAAATCTGATTGAAGGAGGGCACCAACCATCTTTAGCAACATACACAACCCTGTTAAATGCCTTAACCACTCAGAAGTATTTCAAGCCTATACATTCCATTGTCTCACTGGTTGAAGAAAAACAAATGAAGCCTGACTCAATATTTTTTAATGCTCTTATAAATGCATTTGCTGAATCTGGGAACATGGAGGATGCCAAGAAAGTTGTTCAGAAAATGAAAGAAAGTGGATTAAAACCTAGTGCTTGTACTTATAACACATTGATAAAAGGATATGGGATTGCAGGTAAGCCTGATGAGTCAATGAAACTGCTAGATCTGATGTCAACAGAAGGAAATGTGAAACCCAATCTCAAGACATACAATATGCTAATAAGAGCTTTGTGTAAAATGGAGAACATTTCTGAGGCATGGAATGTGGTGTATAAGATGACTGCTTCGGGAATGCAACCAGATGTTGTTACCTTCAACACTATAGCAACCGCTTATGCTCAGAATGGAAAGACTGCTCAGGCTGAAGCAATGATTTTAGAGATGCAGAGGAACAGTTTGAAACCCAATGAGAGAACTTGCACCATCATCATAAGTGGATATTGTAGAGAAGGTAAAGTACAGGAAGCTTTAAGGTTTGTATACAGGATGAAGGATCTGGGGATGCAGCCTAATCTTATTGTACTTAATTCCCTGGTTAATGGTTTTGTGGACATGATGGATCGAGATGGTGTCGATGAGGTGTTAAAGTTGATGGAAGAATTTCAGATCCGACCAGATGTGATAACATATAGTACTATAATGAATGCATGGAGCCAAGCTGGATTCTTGGAAAAATGCAAGGAAATCTACAATAACATGCTAAAATCTGGTGTTAAGCCAGATGCGCATGCTTATAGTATTCTTGCTAAAGGTTATGTGCGAGCACAAGAAATGGAAAAGGCTGAAGAAATGCTTACTGTCATGACTAAATCAGGTGTCCACCCAAATGTGGTTATATTTACAACTGTCATAAGTGGATGGTGCAGTGTTGGCAGAATGGACAATGCCATGAGGGTTTTTGACAAGATGGGTGAATTTGGGGTTTCTCCAAATTTGAAGACTTTTGAGACACTAATCTGGGGATATGCAGAAGCAAAACAACCCTGGAAAGCAGAAGGAATGCTCCAAATAATGGAAGAATTTCATGTTCAACCCAAGAAATCGACCATTTTGCTTGTTGCGGAAGCTTGGCGTTTTGCTGGATTTAAAGAAAGGGCAAAGACACTACTAAGGACTGTAAAAGCGAAGATGGCCAATTCAATAGGCAAAGACGACAATAAACCTGCTAAAATGTCAGAGAAAATTTATCAAAAGCCACATACTAATGCTCCTTTTTGTAGTCTCTTACAGATTCCGTCTATATCTTCCACTGACCAGAAAGGTTCAGCTTTAACATCTAGAAGAAATAGAAGGCTCCTTAGAGATGGTGCTGTGGAGACTCTGTTGCTCACAACAAAATTCAAGTGTCATCCTCAAATTTGTAGATATGGTGAAGGATTTTCCATTATGGGCAAACAGTTTCAAGGACAGCATGGTACATACCAATTTGCAAATTCATGTACAGCAGTATTCTTAAACTGA 1899 0.3886 MGKPGNDDTDCGTRSRKQSGNNNMKKGLFHSEFDKGNHFDGKNHMNEITKATNSGSQPSCTFCMGKNDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLLRTVKAKMANSIGKDDNKPAKMSEKIYQKPHTNAPFCSLLQIPSISSTDQKGSALTSRRNRRLLRDGAVETLLLTTKFKCHPQICRYGEGFSIMGKQFQGQHGTYQFANSCTAVFLN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01304 632 SUPERFAMILY HCP-like 82 271 - -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 210 IPR002885 -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 387 421 IPR002885 -
Gma14g01304 632 PANTHER OS01G0228400 PROTEIN 1 632 - -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 141 175 IPR002885 -
Gma14g01304 632 Pfam PPR repeat 208 239 IPR002885 -
Gma14g01304 632 Gene3D Tetratricopeptide repeat domain 415 554 IPR011990 GO:0005515
Gma14g01304 632 Gene3D Tetratricopeptide repeat domain 62 128 IPR011990 GO:0005515
Gma14g01304 632 Gene3D Tetratricopeptide repeat domain 129 228 IPR011990 GO:0005515
Gma14g01304 632 Gene3D Tetratricopeptide repeat domain 229 335 IPR011990 GO:0005515
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 422 456 IPR002885 -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Gma14g01304 632 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 632 - -
Gma14g01304 632 Gene3D Tetratricopeptide repeat domain 337 414 IPR011990 GO:0005515
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 145 176 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 354 388 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 249 283 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 285 317 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 390 423 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 178 212 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 424 457 IPR002885 -
Gma14g01304 632 TIGRFAM PPR: pentatricopeptide repeat domain 215 248 IPR002885 -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Gma14g01304 632 MobiDBLite consensus disorder prediction 1 32 - -
Gma14g01304 632 Pfam PPR repeat family 140 187 IPR002885 -
Gma14g01304 632 Pfam PPR repeat family 421 469 IPR002885 -
Gma14g01304 632 Pfam PPR repeat family 246 295 IPR002885 -
Gma14g01304 632 Pfam PPR repeat family 351 399 IPR002885 -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Gma14g01304 632 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01304 Gma-Chr14 25055407 25059269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01304 136 522 Glycosyltransferase AT1G05670 25.840 8.74e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01304 K17710 - gmx:100779093 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01304 14 25055407 25059269 Gma14g01304 14 25055407 25059269 ECH