Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01248 AGCAGAAAACCTTATTCTTGCATCGGATCCAGATCGTGAGGGAGAAGCTATTGCTTGGCACATCATTGAGATGTTACAACAACAGGGTGCTCTACACGATAATATTTCCTTAGCAAGAGTAGTCTTTCACGAAATAACTGAAAAATCCATAAAAGGTGCCCTACAAACACCACGAGAGATTGACGTAAATTTGGTTCAAGCTTACCTTGCTCGGCGGGCTCTTGATTACTTGATTGGGTTTAACATTTCACCATTACTATGGAGGAAGTTACCAGGTTGCCAATCAGCTGGAAGAGTTCAATCTGCTGCACTTTCTCTTATATGTGATAGAGAAATGGAAATTGATGAATTTAAACCGAAGGAGTATTGGACTGTGGAGGTTCAAATGAAAAAGAAAGAGCTGAGATCAAACAAGAACCTTACTTTTCCTGCTCACTTGACCCATTTTGATTCAAAAAAGTTGAATAAGTTTTCAATTACTTCTGATACCGAGGCAAGAGATATTCGAAGCAATATAAACTCAGCTGATTTTCATGTTGTTAGCTTGAAAAAAAACAAAAGTCGAAGAAATCCTCCAACACCTTATATAACATCGACACTTCAGCAAGATGCTGCAAACAAGTTGCATTTCACTGCAATGCAGCTTGCACAGAAGCTCTACGAGGGAGTTGAACTGTCTGACAGTGTAGCAGTGGGTCTGATAACATATATCAGAACTGATGGACTCCATATTTCTGATGAAGCTGTAGCTAGTATACGCTCGCTGATCATTGAAAGGTATGGACAAGATTTTGTCTCACAAAGTGCACCAAAGTATTATAAAAAGGTGAAAAATGCACAAGAGGCCCATGAAGCCATTAGACCAACTGACATACGCAAGTTGCCATCAATGCTTTCTGCGATACTTGATGAAGAATCCTTGAAGCTCTACACACTTATTTGGTCACGAACAGTTTCATGTCAAATGGAACCTGCTGTCTTTGAGCAGATACAACTTGATATTGGAAATCTTGATGAGTCTATTATATTACAGTCTTCCATCTCAAGGGTTGAGTTTCCTGGATATCGAGCAGTTTTTACGGACATTGTTAGTGAAGCTGTTCAAGATAAAGGCAGTGATGAATCCAGCCACGATCAAACATTTGGAGTACTAAATTCCTTGAAGACAGGGGATTCATTACACGTGGTTCAAACTGAACCTAATCAGCACCATACACAGCCGCCACCACGGTACTCTGAAGCATCATTGGTTAAGAAGCTTGAGGAGCTTGGGATTGGAAGGCCATCAACATATGCATCCACGATAAAAGTTTTGCAGGATAGAAACTATGTGACAGTAAAAAGTCGAGTTCTGTCTCCAGAATTTCGTGGTCGCATGGTTTCAGCTTTTCTGTCGAACCATTTTTCAGAGGTCACGGACTACAGTTTTACTGCCGATATGGAAACCGAGCTTGATAATGTTTCTGCTGGATTAACTGAATGGAAAGGCCTCCTTAGAGACTATTGGACACGATTTAAATCATATTGTGAGCGTACTTCCAATGTTCATATTCATCAGGTAGAGAAGATGTTGGAAAAGAAATTTGGCGATTATTTATTTGCTTCTCTCCCAGATCAGAGTCGGGTGTGTCCAAGCTGTATGGAAGGCACACTTATTTTTAAAGTAAGTAGATTTGGTGCTGGGTACTTTATAGGCTGTGATCAACATCCGAGGTGCAAGTACATTGCTAAAACATTATATGGTACCGAGGAGGAAGAGGATGCATCTCAGCCAAACACTAGAATAGAGGAACCAAAACTCCTTGGTGTTACCAGTGGTTCAAATGAAAAGGTTCTTTTGAAAAGTGGTCCTTACGGAGTCTATGTTCAGCTCGGAGAAGATAGGAAGGGATACATACCTAGAAGAGCTTCTGTCTCTCATATCAAGGATGTGGATTCTATCACTCTTAAAGATGCACTTGAGGTGCTACAATACCCATTGACATTGGGTAACCATCCTAAGGATGGACAGCCTGTCATATTAAGGCTTGCAAGAGCTGGGTTTTGTGTTAGACATCGGCGAACAATTGCTTCTATTCCTAAGAATGTGAAGCCAAGTGATGTCACCCTGGAAAAAGCCCTTGAATATTTATCTGGTGATGATGTGAGACGATCTGGTCGTCCAAAAAAAGGCAAATCTAAAGTTGAAGTTGAAGTTATTGAAGCGTTTTAA 2212 0.4051 AENLILASDPDREGEAIAWHIIEMLQQQGALHDNISLARVVFHEITEKSIKGALQTPREIDVNLVQAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIDEFKPKEYWTVEVQMKKKELRSNKNLTFPAHLTHFDSKKLNKFSITSDTEARDIRSNINSADFHVVSLKKNKSRRNPPTPYITSTLQQDAANKLHFTAMQLAQKLYEGVELSDSVAVGLITYIRTDGLHISDEAVASIRSLIIERYGQDFVSQSAPKYYKKVKNAQEAHEAIRPTDIRKLPSMLSAILDEESLKLYTLIWSRTVSCQMEPAVFEQIQLDIGNLDESIILQSSISRVEFPGYRAVFTDIVSEAVQDKGSDESSHDQTFGVLNSLKTGDSLHVVQTEPNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTIKVLQDRNYVTVKSRVLSPEFRGRMVSAFLSNHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYGTEEEEDASQPNTRIEEPKLLGVTSGSNEKVLLKSGPYGVYVQLGEDRKGYIPRRASVSHIKDVDSITLKDALEVLQYPLTLGNHPKDGQPVILRLARAGFCVRHRRTIASIPKNVKPSDVTLEKALEYLSGDDVRRSGRPKKGKSKVEVEVIEAF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01248 736 Pfam Toprim domain 2 45 IPR006171 -
Gma14g01248 736 Pfam Topoisomerase DNA binding C4 zinc finger 541 577 IPR013498 GO:0003677|GO:0003916|GO:0005694|GO:0006265
Gma14g01248 736 PRINTS Prokaryotic DNA topoisomerase I signature 424 438 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 PRINTS Prokaryotic DNA topoisomerase I signature 231 240 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 PRINTS Prokaryotic DNA topoisomerase I signature 309 325 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 PRINTS Prokaryotic DNA topoisomerase I signature 4 17 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 PRINTS Prokaryotic DNA topoisomerase I signature 94 112 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 Gene3D Topoisomerase I, domain 4 191 324 IPR013826 -
Gma14g01248 736 Gene3D Bacterial Topoisomerase I, domain 1 534 586 - -
Gma14g01248 736 PANTHER DNA TOPOISOMERASE, TYPE IA, CORE 1 729 IPR000380 GO:0003677|GO:0003917|GO:0006265
Gma14g01248 736 SUPERFAMILY Prokaryotic type I DNA topoisomerase 2 550 IPR023405 -
Gma14g01248 736 Hamap DNA topoisomerase 1 [topA]. 1 686 IPR028612 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 PANTHER BNAA01G05990D PROTEIN 1 729 - -
Gma14g01248 736 SMART topIban2 36 124 IPR003601 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 ProSiteProfiles Toprim domain profile. 1 45 IPR006171 -
Gma14g01248 736 Gene3D Topoisomerase I, domain 3 116 408 IPR013825 -
Gma14g01248 736 Gene3D Topoisomerase I, domain 2 70 502 IPR013824 -
Gma14g01248 736 Gene3D - 1 66 - -
Gma14g01248 736 CDD TOP1Ac 63 508 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 TIGRFAM topA_bact: DNA topoisomerase I 1 576 IPR005733 GO:0003677|GO:0003917|GO:0006265
Gma14g01248 736 Pfam DNA topoisomerase 59 497 IPR013497 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 ProSitePatterns Prokaryotic DNA topoisomerase I active site. 217 240 IPR023406 GO:0003917
Gma14g01248 736 SMART topIaneu2 183 461 IPR003602 GO:0003677|GO:0003916|GO:0006265
Gma14g01248 736 Pfam Topoisomerase C-terminal repeat 665 711 IPR025589 -
Gma14g01248 736 Pfam Topoisomerase C-terminal repeat 607 661 IPR025589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01248 Gma-Chr14 20880620 20914807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01248 - - gmx:100778913 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01248 14 20880620 20914807 Gma14g01248 14 20880620 20914807 ECH