Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00871 ATGGCTTTGCGGCTTTTGGTATCGCGGGTTGCAAGACGACAGATTAAAAGTGTGTTTGCTACAAGCTATTTTTCTGTCAATAAGCTTGGAGATCGTGCAGGAAATAGACTTTTGGGTGCTCAAGAGAGATTTCAATCTAGCTACCTTGGCAGTATTGCTCGTCGAGCACGTGATGCAGATGAAGCCGCTGAAGTTGCTTATCTCAAAGAACTTTACCATCAGAATGATCCTGAGGCTGTGATTAGAGTATTTGAAAGCCAGCCATCTCTGCACAATAGTCCCTCAGCTCTATCTGAATACGTAAAAGCATTGGTGAAAGTTGATAGGCTTGATGAAAGTGAATTACTGAAGACATTAAGGAGAGGTGGCATGTCCAATTCAGTGACTGAGGAAAAAACTGTAGGTGGTCTTTCTGCTTTAAGAAATTTGGGAAAATCAACAAAAGACAATACTATTGGAACTGCTAGTAATCCAATTCATATGGTGGCTAGAGAAGGTGGGAATATAAAAGATCAGCTATGGCGTACATTTAGGTTCATTGTGGTGTCCTTTTTCATGATTTCTGGTGTAGGAGCACTCATTGAAGATAAAGGAATTAGTAAAGGACTTGGTATAAATGAAGAAGTGCAACCTAGCATGGAATCAAGTACAAAATTTAGTGATGTAAAAGGTGTCGATGAGGCAAAGGAAGAGCTGGAAGAAATTGTTCACTACCTTCGAGATCCTAAGCGCTTTACTCGTCTTGGTGGTAAGCTTCCAAAAGGAGTTTTGCTTGTTGGTCCACCTGGCACTGGAAAAACTATGTTAGCAAGAGCTATTGCTGGAGAGGCTGGGGTTCCATTCTTCTCCTGCAGTGGTAGTGAATTTGAAGAGATGTATGTTGGTGTTGGTGCACGAAGGGTGAGGGATCTTTTTTCTGCTGCAAGGAAGCGAGCACCTGCTATAATATTCATTGATGAGATAGATGCTATTGGAGGAAAACGAAATGCAAAGGACCAAATGTACATGAAGATGACGTTAAATCAGTTACTGGTTGAGCTAGATGGATTCAAGCAAAATGAGGGCATAATTGTGATTGGCGCTACTAATTTTCCACAATCATTGGATAACGCATTGGTGAGACCTGGGCGGTTTGATCGCCATGTTGTTGTTCCCAATCCTGATGTAAAAGGAAGACAACAGATTTTGGAATCACACATGTCAAAGGTTCTGAAGGCTGATGATGTTGATCTAATGATCATTGCCCGAGGAACACCGGGGTTCTCTGGTGCTGACCTTGCAAACTTGATTAACATTGCTGCTATCAAGGCGGCAATGGATGGTGCTAAAGCTGTGAGCATGGCTGATTTAGAGCATGCAAAAGACAAGATCCAGATGGGAAGTGAACGCAAGTCAGCTGTCATATCTGAGGAGTCACGGAAGTTGACTGCTTTCCACGAGGGTGGCCATGCCCTTGTGGCCATACATACTGATGGGGCCCTCCCTGTTCACAAGGCAACTATAGTTCCCCGTGGAATGGCTCTTGGCATGGTTACTCAATTGCCTGACAAGGACGAGACCAGCATTTCCCGTAAACAGATGCTTGCTACGCTTGATGTTTGCATGGGAGGTCGTGTCGCTGAAGAGCTAATTTTCGGAGAGAACGAAGTCACTTCTGGTGCATCCTCAGATCTCAGGAAAGCAACTAGTCTGGCAAGGGAGATGGTTACCGAATATGGCATGGGCAATGAAGTTGGACTAGTCACTCACGATTATGAAGATGATGGTAGGAGCATGAGCTCAGAGACTAGGCTTCTTATTGAGAAAGAGGTGAAGCAATTCCTGGAGAGGGCCTACAACAATGCAAAAACTATTCTGACCACTCACAACAAGGAGCTTCATGCACTTGCGAATGCCCTTCTGGAGCATGAAACCCTTTCAGGAACTCAGATAAAGGCATTGCTTGCCCAAGTTAGATCTCAGATGCAGCAGCAGCAGCCCCAAACACTTGAAGCTCAGAACAGTTCACAATCCAACACAGTGCCTCCATCATCTAGCAACCCGGCATCTGCTGCTGCTGCTGCTGCAGCTGCCGCCGCCACCACAGCCGCAGCTACAGCTACTGCTGCTGCCGCCAAGGCTAAAAGTGCTCCAGTGGGATCTTAG 2145 0.4527 MALRLLVSRVARRQIKSVFATSYFSVNKLGDRAGNRLLGAQERFQSSYLGSIARRARDADEAAEVAYLKELYHQNDPEAVIRVFESQPSLHNSPSALSEYVKALVKVDRLDESELLKTLRRGGMSNSVTEEKTVGGLSALRNLGKSTKDNTIGTASNPIHMVAREGGNIKDQLWRTFRFIVVSFFMISGVGALIEDKGISKGLGINEEVQPSMESSTKFSDVKGVDEAKEELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMYVGVGARRVRDLFSAARKRAPAIIFIDEIDAIGGKRNAKDQMYMKMTLNQLLVELDGFKQNEGIIVIGATNFPQSLDNALVRPGRFDRHVVVPNPDVKGRQQILESHMSKVLKADDVDLMIIARGTPGFSGADLANLINIAAIKAAMDGAKAVSMADLEHAKDKIQMGSERKSAVISEESRKLTAFHEGGHALVAIHTDGALPVHKATIVPRGMALGMVTQLPDKDETSISRKQMLATLDVCMGGRVAEELIFGENEVTSGASSDLRKATSLAREMVTEYGMGNEVGLVTHDYEDDGRSMSSETRLLIEKEVKQFLERAYNNAKTILTTHNKELHALANALLEHETLSGTQIKALLAQVRSQMQQQQPQTLEAQNSSQSNTVPPSSSNPASAAAAAAAAAATTAAATATAAAAKAKSAPVGS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00871 714 Gene3D - 387 460 - -
Gma14g00871 714 SUPERFAMILY FtsH protease domain-like 467 651 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g00871 714 MobiDBLite consensus disorder prediction 655 690 - -
Gma14g00871 714 CDD AAA 223 385 - -
Gma14g00871 714 Pfam Peptidase family M41 467 646 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g00871 714 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 668 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma14g00871 714 PANTHER METALLOPROTEASE M41 FTSH 39 684 - -
Gma14g00871 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 480 IPR027417 -
Gma14g00871 714 Gene3D Peptidase M41 461 659 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gma14g00871 714 Pfam AAA+ lid domain 408 451 IPR041569 -
Gma14g00871 714 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 39 684 - -
Gma14g00871 714 Pfam ATPase family associated with various cellular activities (AAA) 256 385 IPR003959 GO:0005524|GO:0016887
Gma14g00871 714 SMART AAA_5 252 388 IPR003593 -
Gma14g00871 714 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 208 648 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gma14g00871 714 ProSitePatterns AAA-protein family signature. 356 374 IPR003960 GO:0005524|GO:0016887
Gma14g00871 714 Gene3D - 204 386 IPR027417 -
Gma14g00871 714 MobiDBLite consensus disorder prediction 655 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00871 Gma-Chr14 9384660 9391407 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00871 56 648 Miscellaneous Gene Families AT5G53170 52.117 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00871 K08955 - gmx:100776957 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00871 14 9384660 9391407 Gma14g00871 14 9384660 9391407 ECH