Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00682 ATGTTTGGCGAAACCGCTCCACGTCCAAAGTTCGTGCAATCGGAGCCGAGAATGTCGGCAACGGAGGTGCTCACCGACGACGAGTTCGCGATGCGACGCAGCAGCACGGTGTCGCCGATGAGCTCTTACTGCTCCGAGCCCGGAAGGTTAAGCGGCGAAGGCTCACCCATGATGATGTCGCCGTGGAACCAGACAACGAATTCCTCATTCTCGAAACCTCATTGGTCTCAAGAGCATAACAGCACCTTGCATGAAGCCCTCGTAGGTTCTCTTATCCGACAAGAGGGACACATCTATTCCCTCGCTGCCTCCGGTGATCTTCTTTTCACCGGTTCCGACAGCAAGAACATTCGTGTCTGGAAGAATCTCAAGGAACATTCCGGGTTCAAATCGAACAGCGGTTTGGTGAAAACCATAATACTGTCTGATCAGAAAATCTTCACCGGTCACCAAGACGGCAAAATCCGCGTCTGGAAGGTCTCCCCCAAGAACCCTAGAGTCTACAAACGTGCCGGCACATTGCCAACGCTTAAAGACATCTTCAAGAGCTCAATTAACCCCAGCAACTACGTCGAGGTTCGACGACACAAAACAGCGTTATGGATCAGACACTCCGATGCCGTTTCGTGTTTGAGCCTTTCAGAAGACAAAACCTATTTATACTCCGCGTCGTGGGACAGGACAATCAAGGTGTGGAGGATTTCGGACTCCAGGTGCTTGGAGTCCATCCACGCGCACGACGACGCGGTGAACTCCGTCGTGTGCGGGGACGGGGACGTGATGTTTTCCGGCTCGGCGGATGGCACCGTCAAGGTGTGGCGGCGGGAGATGCGAGGTAAAGGCCTGAAGCACGCGGCCGTGAAGACTCTGCTGAAGCAGGAGTACGCGGTGACGGCGCTGGCGGTGGGCGAGGCGGGGTCAATGGTGTACTGCGGCGCCTCGGACGGGTTAGTGAACTGTTGGGGGAGCGGCAAGAATTACGCGCACGGCGGGGTTTTGAAGGGGCACAAGCTGGCGGTGTTGTGCCTGGCCGCCGCGGGGACGTTAGTTTTCAGCGGCTCGGCGGATAAGACCTTATGCGTGTGGAAACGCGAGGGTGTGATTCACACGTGCGTGTCGGTTCTGACGGGCCACAACGGTCCGTTGAAGTGCCTGGCCGTGGAGGAGAACCGTGAATCTGGCGAAAAGGGTGAGCAGGATCGGCGTTGGGTTTTGTACAGTGGGAGTTTGGATAAGTCGGTAAAAATTTGGAGTGTTTCCGAATAG 1266 0.5592 MFGETAPRPKFVQSEPRMSATEVLTDDEFAMRRSSTVSPMSSYCSEPGRLSGEGSPMMMSPWNQTTNSSFSKPHWSQEHNSTLHEALVGSLIRQEGHIYSLAASGDLLFTGSDSKNIRVWKNLKEHSGFKSNSGLVKTIILSDQKIFTGHQDGKIRVWKVSPKNPRVYKRAGTLPTLKDIFKSSINPSNYVEVRRHKTALWIRHSDAVSCLSLSEDKTYLYSASWDRTIKVWRISDSRCLESIHAHDDAVNSVVCGDGDVMFSGSADGTVKVWRREMRGKGLKHAAVKTLLKQEYAVTALAVGEAGSMVYCGASDGLVNCWGSGKNYAHGGVLKGHKLAVLCLAAAGTLVFSGSADKTLCVWKREGVIHTCVSVLTGHNGPLKCLAVEENRESGEKGEQDRRWVLYSGSLDKSVKIWSVSE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00682 421 Gene3D - 195 281 IPR015943 GO:0005515
Gma14g00682 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 405 421 IPR001680 GO:0005515
Gma14g00682 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 238 - -
Gma14g00682 421 PANTHER PROTEIN JINGUBANG 10 421 - -
Gma14g00682 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 333 363 IPR001680 GO:0005515
Gma14g00682 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 243 273 IPR001680 GO:0005515
Gma14g00682 421 Gene3D - 282 421 IPR015943 GO:0005515
Gma14g00682 421 SUPERFAMILY WD40 repeat-like 91 420 IPR036322 GO:0005515
Gma14g00682 421 Gene3D - 62 194 IPR015943 GO:0005515
Gma14g00682 421 CDD WD40 95 418 - -
Gma14g00682 421 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 10 421 IPR045182 -
Gma14g00682 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 242 IPR001680 GO:0005515
Gma14g00682 421 Pfam WD domain, G-beta repeat 238 273 IPR001680 GO:0005515
Gma14g00682 421 Pfam WD domain, G-beta repeat 370 418 IPR001680 GO:0005515
Gma14g00682 421 Pfam WD domain, G-beta repeat 95 121 IPR001680 GO:0005515
Gma14g00682 421 Pfam WD domain, G-beta repeat 204 232 IPR001680 GO:0005515
Gma14g00682 421 Pfam WD domain, G-beta repeat 331 363 IPR001680 GO:0005515
Gma14g00682 421 PRINTS G protein beta WD-40 repeat signature 220 234 IPR020472 -
Gma14g00682 421 PRINTS G protein beta WD-40 repeat signature 261 275 IPR020472 -
Gma14g00682 421 PRINTS G protein beta WD-40 repeat signature 405 419 IPR020472 -
Gma14g00682 421 SMART WD40_4 84 121 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 194 233 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 236 274 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 283 322 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 326 363 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 368 418 IPR001680 GO:0005515
Gma14g00682 421 SMART WD40_4 122 159 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00682 Gma-Chr14 6718145 6720308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00682 194 419 Miscellaneous Gene Families AT5G08390 23.605 1.70e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00682 - - gmx:100813672 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00682 14 6718145 6720308 Gma14g00682 14 6718145 6720308 ECH