Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00600 ATGGCTTTGTCTTCTTCTGAGCCTCCTCCACCTTCAGTTCCTGCTCCCGTTCAATCTAACCCTCCTCCACACTTGATGTACAAAAATCGTTTACAAGAGTTTACTTCAAAGTCAGGCATTAACTTTCCTGTGTATCAGACCATTAATGAGGGACAGGATCATAGTCCAAAATTTAGGTCGACTGTGTGGGTCGCTGATATGGGTTACACTTCCCAATCCACATTTTCCCATAAAAAAGCTGCTGAGCATGAGGCAGCTAGACTTGCTTTGGAAAGTATCCTTAAGAGGACCAGAGATGAAGGACTCTCTCTTGTCAATCAGATTTCTCCATTTTCCAAGTCTATCATGAATGAGTACGCTGACAAACTGCATGTAGAACAACCTACATACAACACTGATCAGCAACAGCTAGGAGGGGTGCTTCCTATCTTTATAACTTCTTTAGTTTTCAATGGTACAAGTTACACTGGTGATCCAGCTAGAACAAAAAAGGAAGCTGAGCAGTCAGCCGCAAAGGCTGCAATTCTTTCAATTATGGGTGATTCTAGCTCGGGAACTGTGCTTGTTGAGATTATTAAGTCAAAGTCTATATTTTATGATGCAATCAAAGGAAAGGGACGATCTCTGTCACAGCCTAGTGCAGTGTTATCCACAACAAATGCAGGACAGATCTCTATTACACTGGATCATAAAGATACAGAAGTTGCAGCTTGTGTGGCTGATAATAATAATAATGAGACTAAAGTTGAATTTCCTGAGTTTCCTAAGATGCTTTCCACATGTCAAGAACTCCAAATGATACATCAAGAATCTTCCCTTGAAGCCAATAATGTCTCTTTGCAGCCGGGTTCAGAACATTCCATTGATAATGATTCAACTTCAAAAAAGCGGAAAAAGAACAAGAAGAAGTCTAATAAGAAGTTACGGTCACAGACTCCGCTGTCACCGATTACTGGGgttcccttgaaccaagtccctccacgtactggagttctcatgaaccaagttactccttgttctacatttctcatgaaccaagttcctccttgtactgctgttcccatgaaccaagttcctccttgtactgcagttcccatgagccaactttatgctcgtacttctcccatggaccaagtccctcctcgtacagctcccatgaaccaagttatgccgtgtactgcagctcccatggaccaaggccctcctcgtactgcagctcccatgaaccaagttccaccgtgtagtgcatttcccatgattcaagtcgctccttgtacttcagctactgcagctccgatgaaccaagttccccctgcagctccgatgaaccaagttcccccttgcactgcagcttccatgaacaaagtCCCTCTTTTATAG 1380 0.2877 MALSSSEPPPPSVPAPVQSNPPPHLMYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEAARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFITSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSIFYDAIKGKGRSLSQPSAVLSTTNAGQISITLDHKDTEVAACVADNNNNETKVEFPEFPKMLSTCQELQMIHQESSLEANNVSLQPGSEHSIDNDSTSKKRKKNKKKSNKKLRSQTPLSPITGVPLNQVPPRTGVLMNQVTPCSTFLMNQVPPCTAVPMNQVPPCTAVPMSQLYARTSPMDQVPPRTAPMNQVMPCTAAPMDQGPPRTAAPMNQVPPCSAFPMIQVAPCTSATAAPMNQVPPAAPMNQVPPCTAASMNKVPLL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00600 459 Pfam Double-stranded RNA binding motif 27 91 IPR014720 -
Gma14g00600 459 Pfam Double-stranded RNA binding motif 113 175 IPR014720 -
Gma14g00600 459 PANTHER RIBONUCLEASE III 3 305 IPR011907 GO:0003723|GO:0004525|GO:0006364
Gma14g00600 459 SMART DRBM_3 112 179 IPR014720 -
Gma14g00600 459 SMART DRBM_3 27 94 IPR014720 -
Gma14g00600 459 MobiDBLite consensus disorder prediction 7 21 - -
Gma14g00600 459 SUPERFAMILY dsRNA-binding domain-like 112 193 - -
Gma14g00600 459 MobiDBLite consensus disorder prediction 278 322 - -
Gma14g00600 459 SUPERFAMILY dsRNA-binding domain-like 21 93 - -
Gma14g00600 459 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 111 180 IPR014720 -
Gma14g00600 459 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 26 95 IPR014720 -
Gma14g00600 459 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 3 305 - -
Gma14g00600 459 MobiDBLite consensus disorder prediction 1 23 - -
Gma14g00600 459 Gene3D - 109 179 - -
Gma14g00600 459 Gene3D - 23 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00600 Gma-Chr14 5849065 5853914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00600 - - gmx:100798730 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00600 14 5849065 5853914 Gma02g02327 02 49359831 49363911 GST
Gma14g00600 14 5849065 5853914 Gma11g02203 11 37265931 37269324 PCT