Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00143 ATGGCACTCGAATCTTGGGTTCTCAGTCACCAAGTGTTCACCTCCAGTTCCAGATTGTTTTACCCTGCGCATGAGAATCGGCGAAAGAGCTTACCAATCAAAGTTTTGGGTAGAAACACTAGATACCCATTTCCCTTTGTGCCCAATTGTGTTGCTCCATCCACTTTTGCAAGGCTTCAGGCTTCAAGTTTTGGAACAGATGCCAAGTTACTAGATAGAACTAAGTTGAGGTGTTTAGGTAGTAGCAGCGATTGTTTGAGCGATAGAAATGCCGTTTCCAAAGCCAATTTGAACTTTATACAGGAATTGTTAAAGAGGGGAATCATCCTGGCTGCAACTGTTTGTGGGGTATTGGTGTTTGGATGTTCACGAGTTTTCGCCGTTGAAGGGGTTGCGAATGCAGGATATGGTGTTTTTGGACAGAGCATTCTTTTGCTTACGAATACATGGCCTAAAGTGTTGCAAGTTCTTCGTATATTTAAGGAGCAAGGTTTGGTGCTGGCAGTGCTTTTGGGCCTTTCAGCTTTTTTCTCGATGGCAGAGACTTCAATCACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCCGAAAAGGAGCCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGGTTCCTTACAACAATACTTATTGGCACAACGGTGGTCAATATTGGGGCAACTGCTCTGGTCACTGAAGCAGCAACTGCTATGTTTGGTGAAGCTGGTATCAGTGCAGCAACAGGAGTGATGACTGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATAGCTGTTCATAATGCCACAGAAGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCTTGGTGTTGTACCCTGTAGGAAGAATTGTTACCTATCTTTCAATGGGGATGCTGAAATTGCTTGGCCTAAAAGGAAGAAGTGAGCCATATGTAACTGAAGATGAGCTAAAATTGATGCTAAGAGGTGCAGAATTAAGTGGGGCAATAGAGGAGGAAGAACAGGATATGATTGAAAATGTGTTAGAGATAAAAGACACACATGTCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTGGTAGACTTTCATCACTTGTGGGTCACACATCAGTACTCAAGAGTACCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATAGCTTATGCAATGGATCTGCTGGATTATGTTCAAAAGGGTGAGTTGCTAGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCTTATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCAGTTGTTCTTAATGAGTATGGTGGAACTGTGGGGATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATAGTAATGCGAGCTGAGGGTGTTTTTGATGTGGATGCAAACACTTCCATTGATCAGCTCTCTGAAGATTTGAACATCAAGATGCCAGAGGGTCACCAATATGAGACGGTATCAGGCTTTGTGTGTGAAGCATTTGGATACATTCCAAGGACAGGTGAGTGCATCAAAGTAGTTCTTGAAAGGGAAGATGAAGATGATAACAATGAGTCCAATGCTGACCAGCAAGATCAGAAGGAGAAGAACCAGATTTTCAAACTTGAGATACTAGCTGGAAATGCCAGAAAGGTGAGCGCTGTTCGGTTTGAACGCATAAATAATAATGATGAAATGTTGGAGACTAAAGTAACTCGCATGGTCCCCAAAATCATGAAAAGAAAATGGAGCAGTGATGAGAACTCGGACAATGATGCAGAATATGACGGAGATACATTTGCAAAGAGACCACAGGATGACATTCCTAGTGAATATTTAGTTGATCAGGAAAATTCTAACAGAGGGATGCAAACCTTATGTGGCAAAGTAATTGGGGTAGTTCCAAGCAGTTATAGTCCTCGAATATTAAGCAAAATATTTTGCCTCAAGATGACACAGCTCTCTGAATGTACCACTGTTTATCTCCTGCTCTTTGATGGTAACAAGATAAGAATTATGGATTCTCCCTACACAAGTATAGTCTTTGATAAAATTCAGAAATTTGAGCCAGAGAATGCTAGAAAGATAATTGGCTATCTCTTCTTTCAAGGCCATGGAGAACAAGAAATGGCTAAATTGGCTTCATGCCCTGACTATTTCATCCGTGAAGTGGCAGTTCAGGCTAGAAAGGAACTCCAAAGAACTCCTACTTCACCAAACTTTCAGGTGCCTCCTCCCTATTGGGATCCACAATCTGCTGGCAATGTCAATCCGGACTTTATGGGAATGAATTACTTGGATTCTATTGTAGAACTTCAGAAGCAGACACAGATGCTTACTTTGGAGAATCAAATAGATGCTGTAAAAACTGGGACTGGAGGGATTGCCAATGATTACTATGGCTTAGATGCTTCTGCTGCCAATTTGGGTGGAAAAGCTGGGAGAAGGTTTTCTGAATTTCCAATGAAGATATGTCACTATTTCAACAAAGGATTCTGTAAGCATGGAACTAGCTGCAGATTCTATCATGGGCAAGTTGTCCCTGAGAATTTCTCTCAGATGTATGGAAATGATGCTATTAGTGAGGATCAGGTGATTTCACCGGGGTCACTGGCACAGTTAGAGTCTGAAATTATTGAGCTCCTAAGAACAAAAGGTGGTCCAATGTCAATTGCTTCCCTGCCAATGGCATACTACGATAAATATAAAAAGGTACTGCAAGCAGATGGTTATTTAACCGAGAGCCAGAGGCATGGTAAGTCTGGCTATAGTTTGACGAAGCTTCTTGCACGACTGAACAATAGTATTCGGCTAATAGGCAGACCTCATGGACAGCATTCAGTGGTTCTGGCAGAAGATGCTCCCACACAAATGCAAAAGGGAGATTTTGCTCGAAATATCAGTGCTTCACGGCAAATATATCTGACGTTCCCAGCTGACAGCACTTTCACAGAGGATGATGTCTCAAACTACTTCAACACATTTGGACCTGTTGCAGATGTCAGAATTCCTAACCAGCAGAGAAGGATGTTTGGATTTGTGACATTTGTTCATTCAGAAACTGTCAAAACTGTTTTGGATAAGGGCAATCCCCATTGTGTTCGGGGTTCTCGGGTGCTTGTGAAACCTTACCAGGAGAAGGCAAAGGTTAATGAAAGGAAGTACACAGATAGAATTGAGCACCCTGTTTGTTATTCACCACACTATGTAGATATCGACACTGAACTTAACTCAATTCCAAGAAGTTTTGGGAACCATAGATCCATTAGGAGACAGCTACAACTAATCGAAGAGGAAGAGCAGGGGCGATCCCTGGAACTTAAGAAGAGAAGTCTTGCACAGCTGCCGTTTGCCCAAAAATATTTCTTCAGTTCACCTCATTTTGGCTTCTCCATGGATGAGTCAAGGATTTCAGATGATCACTTCAATTTCCAGCCTGCAGAAGAATCTTTCAGTTTTCCACTGCATGCCAAATCCAGGCATACAGACTCCAATTACTCTGATGAGGACAGCAATCAAGGACTCAATCTCCCGGACAGTCCATTCGCATTTCCACTAGATAGTGGGATGTAA 3702 0.4225 MALESWVLSHQVFTSSSRLFYPAHENRRKSLPIKVLGRNTRYPFPFVPNCVAPSTFARLQASSFGTDAKLLDRTKLRCLGSSSDCLSDRNAVSKANLNFIQELLKRGIILAATVCGVLVFGCSRVFAVEGVANAGYGVFGQSILLLTNTWPKVLQVLRIFKEQGLVLAVLLGLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGISAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREDEDDNNESNADQQDQKEKNQIFKLEILAGNARKVSAVRFERINNNDEMLETKVTRMVPKIMKRKWSSDENSDNDAEYDGDTFAKRPQDDIPSEYLVDQENSNRGMQTLCGKVIGVVPSSYSPRILSKIFCLKMTQLSECTTVYLLLFDGNKIRIMDSPYTSIVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRTPTSPNFQVPPPYWDPQSAGNVNPDFMGMNYLDSIVELQKQTQMLTLENQIDAVKTGTGGIANDYYGLDASAANLGGKAGRRFSEFPMKICHYFNKGFCKHGTSCRFYHGQVVPENFSQMYGNDAISEDQVISPGSLAQLESEIIELLRTKGGPMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSGYSLTKLLARLNNSIRLIGRPHGQHSVVLAEDAPTQMQKGDFARNISASRQIYLTFPADSTFTEDDVSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKTVLDKGNPHCVRGSRVLVKPYQEKAKVNERKYTDRIEHPVCYSPHYVDIDTELNSIPRSFGNHRSIRRQLQLIEEEEQGRSLELKKRSLAQLPFAQKYFFSSPHFGFSMDESRISDDHFNFQPAEESFSFPLHAKSRHTDSNYSDEDSNQGLNLPDSPFAFPLDSGM 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00143 1233 ProSiteProfiles CBS domain profile. 428 486 IPR000644 -
Gma14g00143 1233 Gene3D - 860 919 - -
Gma14g00143 1233 Gene3D - 498 600 IPR016169 -
Gma14g00143 1233 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1025 1081 IPR000504 GO:0003723
Gma14g00143 1233 SUPERFAMILY RNA-binding domain, RBD 1025 1101 IPR035979 GO:0003676
Gma14g00143 1233 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1014 1089 IPR000504 GO:0003723
Gma14g00143 1233 Gene3D - 1015 1095 IPR012677 -
Gma14g00143 1233 CDD RRM_AtC3H46_like 1016 1085 IPR034365 -
Gma14g00143 1233 SMART rrm1_1 1015 1085 IPR000504 GO:0003723
Gma14g00143 1233 Gene3D - 336 491 IPR046342 -
Gma14g00143 1233 CDD CBS_pair_CorC_HlyC_assoc 356 477 IPR044751 -
Gma14g00143 1233 PANTHER HEMOLYSIN-RELATED 79 663 - -
Gma14g00143 1233 Coils Coil 1232 1233 - -
Gma14g00143 1233 MobiDBLite consensus disorder prediction 1204 1233 - -
Gma14g00143 1233 Pfam CBS domain 425 480 IPR000644 -
Gma14g00143 1233 Pfam CBS domain 357 415 IPR000644 -
Gma14g00143 1233 SUPERFAMILY CBS-domain pair 344 483 IPR046342 -
Gma14g00143 1233 SUPERFAMILY FAD-binding/transporter-associated domain-like 499 607 IPR036318 GO:0050660
Gma14g00143 1233 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 865 888 IPR000571 GO:0046872
Gma14g00143 1233 SMART CorC_HlyC_2 501 604 IPR005170 -
Gma14g00143 1233 ProSiteProfiles Zinc finger C3H1-type profile. 862 889 IPR000571 GO:0046872
Gma14g00143 1233 ProSiteProfiles CNNM transmembrane domain profile. 156 342 IPR002550 -
Gma14g00143 1233 SMART c3hfinal6 862 888 IPR000571 GO:0046872
Gma14g00143 1233 Pfam OST-HTH/LOTUS domain 913 991 IPR025605 -
Gma14g00143 1233 ProSiteProfiles CBS domain profile. 361 422 IPR000644 -
Gma14g00143 1233 Pfam Transporter associated domain 502 603 IPR005170 -
Gma14g00143 1233 Pfam Cyclin M transmembrane N-terminal domain 166 342 IPR002550 -
Gma14g00143 1233 ProSiteProfiles OST-type HTH domain profile. 913 995 IPR025605 -
Gma14g00143 1233 PANTHER BNAC03G73630D PROTEIN 79 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00143 Gma-Chr14 1148567 1170174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00143 - - gmx:100778907 1271.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00143 14 1148567 1170174 Gma14g00143 14 1148567 1170174 ECH
Gma14g00143 14 1148567 1170174 Gma02g02795 02 53538726 53547378 GST