Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00117 ATGTGTATTATTAATCAGGAAGCTATCAAGCAGTTGCAGTCCCTTATGGAAAACTTGGATGAGCAACAGAAGAACACATTCCAGATTATGCACCGGGGCTATCCAACAGAAACATTAGTACGGTTTCTCAAAGCAAGGGATGGGAATGTTGTCAAAGCACATAAAATGTTAATTGATTgtttacaatggagagtggaaaatgagattgataatgttttatcgaagcctataccccctgatttgtacagacgtttgcgagattctcaacttgtaggaatgtcgggtttctcaaaggagggcctacctgtcattgctgttggtgttgggctcagcacatttgatgaagtgtttgacaaatattatgtacagtcgcacatccaaatgaacgaatatcgggatcgagtgatgttgccaacagctacaaagaatcatggacgacacattgacacttgtgtgaaagtcttggatatgactggtttaaaactctcggcactgagccagttgaagcttttgacagctatatctacaatagatgacttgaactatccagaaaagacagacgcatattacatcgttaatgttccatatgtattctcagcgtgttggaaggttgtaaagcctcttttgcaagaaagaacaaggaggaaagttcacgtactgaaaggttgtggcatggaggaattactgaaggtaatggactatgcatccctccctcatttttgcagaaagaaggattcgagggtgccccgacatcatTTGTTATATTCAGTTATTGGATGCAATGTAATATACAGTGATTACATCAAGTTGCCACAACCTTCTGGGTGA 828 0.1135 MCIINQEAIKQLQSLMENLDEQQKNTFQIMHRGYPTETLVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLSKPIPPDLYRRLRDSQLVGMSGFSKEGLPVIAVGVGLSTFDEVFDKYYVQSHIQMNEYRDRVMLPTATKNHGRHIDTCVKVLDMTGLKLSALSQLKLLTAISTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRRKVHVLKGCGMEELLKVMDYASLPHFCRKKDSRVPRHHLLYSVIGCNVIYSDYIKLPQPSG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00117 275 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Gma14g00117 275 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Gma14g00117 275 SMART sec14_4 85 246 IPR001251 -
Gma14g00117 275 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Gma14g00117 275 SUPERFAMILY CRAL/TRIO N-terminal domain 6 73 IPR036273 -
Gma14g00117 275 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Gma14g00117 275 Coils Coil 5 25 - -
Gma14g00117 275 Gene3D - 4 254 IPR036865 -
Gma14g00117 275 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 238 IPR001251 -
Gma14g00117 275 PANTHER OS09G0258000 PROTEIN 1 253 - -
Gma14g00117 275 PANTHER - 1 253 - -
Gma14g00117 275 CDD SEC14 90 240 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00117 Gma-Chr14 977012 980219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00117 1 242 Acyl Lipid Metabolism Gene Families AT5G47730 70.370 1.72e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00117 - - gmx:100815791 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00117 14 977012 980219 Gma14g00117 14 977012 980219 ECH
Gma18g00695 18 7155128 7160840 Gma14g00117 14 977012 980219 PCT
Gma14g00117 14 977012 980219 Gma18g00695 18 7155128 7160840 PCT