Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00044 ATGAAGTTAAAAGTAAACCTAATTTTTGTTTCCCTCCTCCACTCCACCGCCCACCTTCGTTCCGACTATCTTTCACTTTCTAATTTCACCAATTCAGGAATGGTGGGTTTATCTCTTGGAGAAAAACATTTCATTCAAGGTGGCATTGGTCAAGATCTTCGTTGTGATGGTAGAAAGAGATTTACATATAAACCAATCTCTGTTGAAACTGAAGTTATTCCCCAGACAAATGGTTCGGCAAGAGTCAGAATGGGTGCTACAGATGTAATTGCCAGTGCTAAGGTTGTCTCTATATATATTGATTGCAGTTCAACTGCAGAGCCAGCTTTTGAGGGTAGAGGGGGTGATGAGTTGGCTGCAGAACTGTCAAATGCTCTTCAACGTTGTCTCTTGGGTGGTAAAAGTGGAGCAGGTGCTAGAATTGGCCTCTCCTCGCTTATTGTCGTTGAAGGAAAAATTTGTTGGGATCTTTACATTGATGGGCTTCTTGTTAATTCAGATGGAAATTTGAAATGGTTAGAAGCTGCTTTGAGCAATACGGGTATTCCAAGAGTCCAAGTTGCTGCTGGAACATCAAATGATGAGCAACCAGAAGTTGACGTAAGCAACGAGGAGTTTCTGCAGTTTGACACATCTGGAGTCCCTGTCATAGTTACACTGGCTAAGGTTGGGACTTGGGAGGCACTATATTGTGGATGCAACATCAGAGGAGGAATCACAAATAAGCTCTGCTGTTTCTCTGTTAATAGGCAAGGGCACATATGTGGTATAACCAAACGAGGAGGTGTAGGGCTGGATCCAAGCACCATTCTTCAATTATTTTGTAACTCGGCTAAACTATGTTTACATACCTTTCTTCCTTCCTTCCATTCTCCAAAATTATATATATATTGTGAAAGGATTGAATTGCTCAGTGGAGTTGAGGATCATCATGGAGGAGTCGTTGTAGACGTCCAAGACCCTATGGATTCTACGCTCTTCTCTTCTATATTGCAAGCTTCAATCTACAAGTGGAGCCAACAGGGCAAGAAGGGGGTCTGGATCAAGTTGCCCATACAACATTCAAATCTTGTTGATCCTGCAGTCAAGGCTGGATTTAGGTACCACCATGCTGAGCCAGATTACTTGATGCTTGTACGTTGGATTCCAGATACTCCTGATACCCTTCCTGCAAATGCTTCACATCGAGTCGGTGTTGGTGCTTTTGTCATCAACAACAACAAAGAGGTAGTGCTTGTGGTTCAGGAGACAGGTGGCAAATTCAGAGGTACAGGTGTATGGAAGATGCCAACAGGAGCTGTTAATGAAGGTGAGGATCTCTGTGAAGCTGCAATTAGAGAAGTCAAAGAAGAGACAGGGGTAAGCAAGCAAAACATAATATATAGTTTAGAGCAAAGCCATAAGTCGTTCTTCGAGAAATCAGATTTGTTCTTTGTTTGCATGTTGCAACCTCAATCGTTTGACATTCAGAATCAGGCTTCAGAAATTGAGGCAGCGAAGTGGATGCCAGTTGAAGATTATGCTGCCCAGCCTTTTGTGCAAGATAATGAGCTCTTTGACTTTATTAGAAAAATATGCTTTTCAAAGCTGGATGGCAACTACAACGGTTTTTCTAACGTGCTTACTTGTACATCTTCTGGCAAAAAAACCTATCTGTATTTTAACAACCGGGATGCCAGCCTTTCGTTAGCTTCCAAAGAGGATCAAGCTTGA 1713 0.4227 MKLKVNLIFVSLLHSTAHLRSDYLSLSNFTNSGMVGLSLGEKHFIQGGIGQDLRCDGRKRFTYKPISVETEVIPQTNGSARVRMGATDVIASAKVVSIYIDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGARIGLSSLIVVEGKICWDLYIDGLLVNSDGNLKWLEAALSNTGIPRVQVAAGTSNDEQPEVDVSNEEFLQFDTSGVPVIVTLAKVGTWEALYCGCNIRGGITNKLCCFSVNRQGHICGITKRGGVGLDPSTILQLFCNSAKLCLHTFLPSFHSPKLYIYCERIELLSGVEDHHGGVVVDVQDPMDSTLFSSILQASIYKWSQQGKKGVWIKLPIQHSNLVDPAVKAGFRYHHAEPDYLMLVRWIPDTPDTLPANASHRVGVGAFVINNNKEVVLVVQETGGKFRGTGVWKMPTGAVNEGEDLCEAAIREVKEETGVSKQNIIYSLEQSHKSFFEKSDLFFVCMLQPQSFDIQNQASEIEAAKWMPVEDYAAQPFVQDNELFDFIRKICFSKLDGNYNGFSNVLTCTSSGKKTYLYFNNRDASLSLASKEDQA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00044 570 Pfam 3' exoribonuclease family, domain 1 63 170 IPR001247 -
Gma14g00044 570 SUPERFAMILY Ribosomal protein S5 domain 2-like 37 205 IPR020568 -
Gma14g00044 570 PANTHER NUDIX FAMILY HYDROLASE 300 561 - -
Gma14g00044 570 Pfam NUDIX domain 395 515 IPR000086 -
Gma14g00044 570 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 396 524 - -
Gma14g00044 570 PANTHER NUDIX HYDROLASE RELATED 300 561 IPR003293 -
Gma14g00044 570 ProSiteProfiles Nudix hydrolase domain profile. 394 526 IPR000086 -
Gma14g00044 570 Pfam Nudix hydrolase domain 304 382 IPR040618 -
Gma14g00044 570 SUPERFAMILY Nudix 343 525 IPR015797 -
Gma14g00044 570 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 354 372 IPR003293 -
Gma14g00044 570 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 392 410 IPR003293 -
Gma14g00044 570 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 376 392 IPR003293 -
Gma14g00044 570 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 480 504 IPR003293 -
Gma14g00044 570 Gene3D - 301 387 - -
Gma14g00044 570 Gene3D - 36 286 IPR027408 -
Gma14g00044 570 SUPERFAMILY Ribonuclease PH domain 2-like 212 281 IPR036345 -
Gma14g00044 570 ProSitePatterns Nudix box signature. 432 453 IPR020084 GO:0016787
Gma14g00044 570 CDD RNase_PH_RRP42 37 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00044 Gma-Chr14 378678 387121 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00044 - - gmx:100818821 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00044 14 378678 387121 Gma14g00044 14 378678 387121 ECH