Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03223 ATGGCTACGACGACTGAAGAAGGGGTCGAGTACGAGAGTGATCCCGAAGAGGCCACGAGATCGCTCGCAATGCGGAGAAGGCGTGAGGCAAGTGATGACGAAGAAGGTGACGCCGACGCTGACGGAAGAGACTCCGCCACCGCCGATCGCCGGATAACTCATTCCGATGACTCCGACGGCGAGGGCGGCGTGGCAGATTATGATGACGAAGAAGAGTTggaagaggaagaggaagaggaggaggaagaagaagaggaaggagaagagAGGGTTGGACTTGAACATGAACATGAACATGAAGGAGGTGCTAATGGCACAGTGGTTAAAGATTCCGATGATGCTGATGTGAAAGCCCCTTTGGAGGAATCAGGGAATGGAAATGAAGAAGAGAAGAAAGAGAATGAACCATTTGCGGTGCCCACTGCTGGAGCCTTTTATATGCACGATGATAGGTTCAGGGACAATGCCGGTGCACGCCACAGGCGTATGCGTGGTGGAAGGAGACTGTGGGAGTCCAAGGATGATAGGAAGTGGGGACATGATAAGTTTGAGGAAATTACTTTGCAGGAAAGGCACTATAAAGAGGGAAGGAGACCTTCTAAGGGTAATTTTCGAGGCCGTGGTGGTAAAACACGAGGTGTTGACCACAGTGGAAGATATGTTAGAGGTAGCCGGAAAGGGTATGATAACAGAGGCAATCAAACTCAAGCACCAAAGAGTGTTGTGCGAGGGAGAGGACCCCAGAGGTATGAGCCTACTAATAAGAACAATGATTCAGCATCCCAGGTGCAAAATAAACAACCTGGGAAGCAGCCAGAGAAAGCATCACATGCTAGTTTGGGAAAAACTTTTGCTCCTGTCTCTAATTCGAAGTCTGATCCTGTGCCTGCTAAGAAACAAGTGTTTGCATCAAATTTGAATTATGCATCCCCCCCCTTTTACCCTTCGAGTTCTTCCAACAAAGATATAAGTGTGGCACCAAAAGGGGATGTCCAAACGGGTGGTACAGGCAGGACTGTTCGCCCTGGTGTTGTGGATGAGGGTTTTTTGGTTCAACAGAACAATGTACTTCTTCGAGGAAAGAATGTTGTTGATCATGTCAGCATGGAGAAGCTATATATTGATGGGCCTGGCACTCCATCTGTTGGAAAGGCTTTTAACAATATGCATATTCCACCACCTGGATCTTCTGGAGTTAATCCTTCTCAGTCTGCTCATCCAAGAGGTCACGGGAGGAGTGGAGCAGTACCAGTGCAGATGAATTATCAGCCTGTTACCTCTCATAATCAACCAAGTAAAATTGATCCAACACAACTCCCGGCTATTCAAAGAACTGCTCCAGGGCGAACTTCACCTTCTTTGCAAGCCCCTGCTCCACAGGTTGGTAATCGACCTGGTAGTGGGTCTCAAGCTTCATCTCCCCCCAAAACATCCAGCGCGATTAGTTCATTGGATTCTGGAGAAATTGATGCAGCTTCAGATTCCGATAAATTGAAGGGTGCATTGGTTGGGAAGGGAAGGGGAGCTCCACAGGGTAGTGGAAGGGGCTCTTTTGTTTATGGTGGAGCTATGGGGACTGCTGGAAATATCAGTGGTACTCATGGAGATCATAACTTCCCAACCTTCTTGCCCGTTATGCAATTTGGAGGGCAACATCCCGGTGGCATAGGAGTTCCTGCTGTTGGCATGGCATTTCCTGGATATGTTGGTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACCTGGCTACCAGTTTTGACTggggcagcgggtgctttaggggcagcgggtgctctaggggcTACATATTGTCCACCCTATCTCACTGTTGATGGTGCTTATCATGCCCGACAATCAGGACAAACATCTGCAACACCTATTTCAAGCAAGGAAAATAATGTGAATAAAGCTAATAATGAATGGAAATCACCACAGAAATCAGAGCCTGTAAATGATGAGTTTGGACAGAGGCAAAATAAGCCCCGCAGATACTCGGAGATGAATTTTGGGCAATGA 2019 0.4542 MATTTEEGVEYESDPEEATRSLAMRRRREASDDEEGDADADGRDSATADRRITHSDDSDGEGGVADYDDEEELEEEEEEEEEEEEEGEERVGLEHEHEHEGGANGTVVKDSDDADVKAPLEESGNGNEEEKKENEPFAVPTAGAFYMHDDRFRDNAGARHRRMRGGRRLWESKDDRKWGHDKFEEITLQERHYKEGRRPSKGNFRGRGGKTRGVDHSGRYVRGSRKGYDNRGNQTQAPKSVVRGRGPQRYEPTNKNNDSASQVQNKQPGKQPEKASHASLGKTFAPVSNSKSDPVPAKKQVFASNLNYASPPFYPSSSSNKDISVAPKGDVQTGGTGRTVRPGVVDEGFLVQQNNVLLRGKNVVDHVSMEKLYIDGPGTPSVGKAFNNMHIPPPGSSGVNPSQSAHPRGHGRSGAVPVQMNYQPVTSHNQPSKIDPTQLPAIQRTAPGRTSPSLQAPAPQVGNRPGSGSQASSPPKTSSAISSLDSGEIDAASDSDKLKGALVGKGRGAPQGSGRGSFVYGGAMGTAGNISGTHGDHNFPTFLPVMQFGGQHPGGIGVPAVGMAFPGYVGQPQLGLGNSEMTWLPVLTGAAGALGAAGALGATYCPPYLTVDGAYHARQSGQTSATPISSKENNVNKANNEWKSPQKSEPVNDEFGQRQNKPRRYSEMNFGQ 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03223 672 MobiDBLite consensus disorder prediction 622 672 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 384 416 - -
Gma13g03223 672 Coils Coil 64 96 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 62 89 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 1 138 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 443 489 - -
Gma13g03223 672 Pfam CASC3/Barentsz eIF4AIII binding 118 209 IPR018545 GO:0003729|GO:0006397|GO:0035145
Gma13g03223 672 MobiDBLite consensus disorder prediction 443 493 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 393 407 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 41 61 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 316 340 - -
Gma13g03223 672 PANTHER PROTEIN MLN51 HOMOLOG 1 672 IPR044796 GO:0003729|GO:0006397|GO:0035145
Gma13g03223 672 PANTHER PROTEIN MLN51 HOMOLOG 1 672 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 90 136 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 155 295 - -
Gma13g03223 672 SMART Btz_2 97 208 IPR018545 GO:0003729|GO:0006397|GO:0035145
Gma13g03223 672 MobiDBLite consensus disorder prediction 622 653 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 167 226 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 14 33 - -
Gma13g03223 672 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03223 Gma-Chr13 46310642 46315288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03223 - - gmx:100816837 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03223 13 46310642 46315288 Gma13g03223 13 46310642 46315288 ECH
Gma13g03223 13 46310642 46315288 Gma15g00131 15 1106481 1113363 GST
Gma13g03223 13 46310642 46315288 Gma07g00324 07 2780255 2790862 PCT
Gma13g03223 13 46310642 46315288 Gma08g01899 08 17055890 17060862 PCT
Gma07g00324 07 2780255 2790862 Gma13g03223 13 46310642 46315288 PCT
Gma08g01899 08 17055890 17060862 Gma13g03223 13 46310642 46315288 PCT