Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03179 ATGGCACCACCCCATGGAAAGTCTTTGCCTAGCTCATTCTCTAAGTGCAACAACAACAACAGCGTTAGCATGTCGAAACCTCCAAGGCTCTCATCTGATCATCACATTCAAAGAACAATCTCAGACATGTCGTTTGAGCTAACCAAGGAAGGGATTGATTTGACGCTTCCACCAATAACTGAGGTTGTGGATGCCAAGTGTGAGTGCTGTGGGATGAGTGAGGAGTGCACGCCCGAATACATAGAGCGTGTGCGTGACAAGTTCTTGGGGAAGTGGGTGTGTGGGTTGTGTGCTGAGGCAGTGAAGGAAGAGTTGGAGAAAAATGGTGGGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTTAGGTTCAACAAATATGGAAGGGCTTTCCCAGTTCTGTTCCAAGCTGAGGCCATGAAAGAGATGCTCAAAAAGAACAAAATGGAAGGGAGAAGGGCCAAGTCCTTCAACCCAAGGGACAAAGGAGGATACTACAAAGGAGGGATTGCAAGGAGTTCAAGCTGCATTCCAGCAATTACAAGAGAGATGAATGGTCTCACATTCGCCAATTAA 582 0.4691 MAPPHGKSLPSSFSKCNNNNSVSMSKPPRLSSDHHIQRTISDMSFELTKEGIDLTLPPITEVVDAKCECCGMSEECTPEYIERVRDKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRAKSFNPRDKGGYYKGGIARSSSCIPAITREMNGLTFAN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03179 193 PANTHER CASP-LIKE PROTEIN (DUF1677) 5 190 - -
Gma13g03179 193 Pfam Protein of unknown function (DUF1677) 62 148 IPR012876 -
Gma13g03179 193 PANTHER OS01G0745000 PROTEIN 5 190 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03179 Gma-Chr13 45940427 45941423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03179 - - gmx:100783355 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03179 13 45940427 45941423 Gma13g03179 13 45940427 45941423 ECH
Gma13g03179 13 45940427 45941423 Gma15g00186 15 1473910 1475034 GST
Gma13g03179 13 45940427 45941423 Gma07g00157 07 1350873 1351385 PCT
Gma13g03179 13 45940427 45941423 Gma08g01851 08 16651433 16652603 PCT
Gma07g00157 07 1350873 1351385 Gma13g03179 13 45940427 45941423 PCT
Gma08g01851 08 16651433 16652603 Gma13g03179 13 45940427 45941423 PCT