Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03164 ATGCTGGATTGTGTCACTTCCCATGACAAAATCACCACAGCAGCTTCTGGCTTCGTACTTGAGGATGTTCCTCATCTATCTGATTACATCCCTCTCCTCCAAACATATCCTGACCCGTTACAAGACAATCCTTCCTATTCTGTTGTTGCGCAATACTACGTGAATGTGGATGATACAATTGCGCAACAGATAGTTGTACACAAAAATAGTCCAAGAGGGACCCATTTTCGTCGTGCTGGGCCTGCTCAGAAGGTATATTTTGATTCAGAGGAAGTGCACGCTTGTATTGTCACGTGCGGTGGACTTTGTCCTGGTCTAAATACAGTGATAAGAGAAATAGTATGCGGCTTATATCATATGTATGGGGTGCACAAAGTTTTGGGAATACAGGGAGGATATCCAGGTTTTTATTCTCGAAATACAGTGCCTTTGACACCAAAGGTTGTGAACGACATACACAAACGTGGTGGAAGCATCCTTGGTACATCATATGGAGGACATGACACCTCAAAGATTGTTGATAGCATTCAGGACCGGGGCATTAATCAGGTTTATATACTTGGAGGATATGGAACTCAGTATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAGGCGTGGCTTGAAAGTTGCAGTGGTCGGAATTCCAAAAACTATTGACAATGATATCCCAgttattgacaagtcaattggtttcgacactgctgttgaagaggcacaacgagcaatcaattctgctcatgtggaagcagaaagcgctgagaatggaattggtgttgtaaaattaatggggcgttacagtgGATTTATCGCCATGTATGCAACTCTTGCCAGCCGTGATGTGGATTGTTGCCTGATTCCCGAATCACCCTTTTACCTGGAGGGTCCAGGAGGCCTGTTGGAGTTCGTTGAGAAAAGACTCAAAGAACAAGGGCACATGGTTATAGTGATAGCTGAAGGTGCAGGTCAGGAGCTTCTTTCTGGCAACCCATCTATTGTTAATAAGCAGGATGCTTCCGCCGACAAGTTATTTCCAGATGTTGGCCTGTGGTTGTCCCAGAAAATTAAGGATCACTTTGAAAAACGTCAAAAAATGGCTATAAATCTGAAGTACATAGATCCTACATACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGCACCCTCCTTGCCCAAAGTGCTGTCCATGGTGCAATGGCAGGATACACAGGCTTCACCGTAGGCCCAGTTAATGGCAGAAACTGTTACATTCCATTTCATCTTATAAACGAGGGAGAGAAGAGGGTTGTGATAACTGATCGGATGTGGGCAAGGTTATTATCTTCAACCCATCAGCCTAGCTTCTTGAATCCAAAAGATATCACAGGTGAAAGAGAGGAAAGAACGGTAAACCAAACCACAGATGGGCAGAACCATTCAGAAACAGCAGACTAA 1446 0.3976 MLDCVTSHDKITTAASGFVLEDVPHLSDYIPLLQTYPDPLQDNPSYSVVAQYYVNVDDTIAQQIVVHKNSPRGTHFRRAGPAQKVYFDSEEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIQGGYPGFYSRNTVPLTPKVVNDIHKRGGSILGTSYGGHDTSKIVDSIQDRGINQVYILGGYGTQYEAAMIFEEVRRRGLKVAVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGPGGLLEFVEKRLKEQGHMVIVIAEGAGQELLSGNPSIVNKQDASADKLFPDVGLWLSQKIKDHFEKRQKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINEGEKRVVITDRMWARLLSSTHQPSFLNPKDITGEREERTVNQTTDGQNHSETAD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03164 481 Coils Coil 236 256 - -
Gma13g03164 481 PANTHER - 6 476 - -
Gma13g03164 481 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 6 476 - -
Gma13g03164 481 Gene3D - 88 278 - -
Gma13g03164 481 MobiDBLite consensus disorder prediction 452 481 - -
Gma13g03164 481 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 23 453 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gma13g03164 481 PIRSF ATP_PFK_TP0108 6 457 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 96 115 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 180 196 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 213 230 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 231 249 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 252 268 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 PRINTS ATP-dependent phosphofructokinase family signature 309 321 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma13g03164 481 SUPERFAMILY Phosphofructokinase 28 457 IPR035966 GO:0003872|GO:0006096
Gma13g03164 481 Pfam Phosphofructokinase 95 400 IPR000023 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03164 Gma-Chr13 45764809 45768115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03164 K00850 - gmx:100796769 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03164 13 45764809 45768115 Gma15g00202 15 1642833 1647148 GST
Gma13g03164 13 45764809 45768115 Gma07g00137 07 1140100 1144468 PCT
Gma13g03164 13 45764809 45768115 Gma08g01833 08 16434221 16439191 PCT
Gma07g00137 07 1140100 1144468 Gma13g03164 13 45764809 45768115 PCT
Gma08g01833 08 16434221 16439191 Gma13g03164 13 45764809 45768115 PCT