Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03152 ATGAACGGTGGCGATGAGGTCGTGGCAGCTCCGGCGGGTCCGCCGCACCCTCTGGAGTGGAAATTTTCGCAGGTCTTCGGAGAACGCACGGCAGGGGAAGAGGTTCAGGAAGTGGACATAATTTCAGCTATTGAATTTGACAAGTCCGGTGATCATCTTGCTACTGGTGATCGGGGTGGTCGAGTGGTTCTCTTTGAGAGAACAGATACAAAAGATCATGGTGGATCAAGTAGGGATTTGGAGAGGGTGGACTATTCTATTGGTAGGCATCCTGAGTTCCGTTACAAAACAGAGTTTCAGAGTCACGAACCAGAGTTTGACTATCTTAAGAGTTTGGAAATTGAAGAGAAAATCAACAAAATCAGATGGTGCCAAATAGCTAATGGTGCCCTCTTCCTTCTTTCTACAAATGATAAAACAATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATTTCTGAGATGAATGTTGACCCTTCAAAATCAATGGGGAATGGATCTATTGCTAGTTCAAGCAATTCAAGTAGTTCTAGGCCATATCTTGCAAATGGAGGATCTCCAGATAGATACAATTATATAAGCAATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGGTAGTTGTAAGTAGCCATGAAACCAGCTTAGTTGCCCGATGCCGTAGAGTGTATGCGCATGCTCATGATTATCACATCAATTCTATTTCAAATAACAGCGATGGCGAAACTTTCATATCAGCCGATGATCTGCGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACAGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATATAGCAGTTCAAAGGGTTCAATCCGTCTTGTTGACTTGCGGCAATCAGCATTATGTGATTCTCATGCCAAACTATTTGAGGAACAGGAAGCTCCAGGGTCCAGATCATTTTTCACGGAGATTATTGCTTCTATCTCGGACATAAAATTTGGGAAGGATGGTAGATACATACTTAGTCGTGATTACATGACTTTAAAGTTGTGGGACATTAATATGGATTCAGGCCCCGTTGCAACTTTCCAGGTTCATGAGTATTTAAGACCCAAGCTTTGCGATTTATATGAAAATGACTCAATCTTTGATAAGTTCGAATGTTGTCTAAGTGGTGATGGATTGCGCTTAGCAACTGGTTCTTACAGCAATCTATTTCGTGTGTTTGGTTGTGCTCCTGGAAGTGCTGAGGCTACAACTCTAGAAGCCAGTAAAAATCCAATGAGACGGCTAGTTCCAACCCCTTCAAGGCCTTCGAGATCACTGGGAAATAGTATAACACGTGTTGTAAGACGGGGAGCAGAAACCCCTGGAGTGGATGCTAATGGGAATTCTTTTGATTTCACAACAAAGTTGCTGCACTTAGCATGGCATCCAAGTGAGAATTCAATTGCTTGTGCTGCTGCAAATAGCTTGTACATCGCAGAGTGGAGGCTCGATTCTGCTTTTTCTTCATATCAATTCTCAACTAACTACCCTTTCTGGAAATCCATGGCATCAAAGATTCCCCAGTTACAATCAAAGGTGAACCAAGCATCACAAGCAGCGAAAAACCATGGAGCTTCATACTACAGGCTATTGTTGGATCAGAATAAACACTATATCCAGGATCCACCCACCATTGAGAAGTGTCAATCATTGGCCAAACAGTTGTTTTATACTCGCCTCGCCAGTATTCCTCATCGTTACAATTCATTCTGGAAGGAATTAGATCATGCAAAGAACCTTGTGAAGAACAGGCAGGACCTAAACATGGAGAAAGTTGGTTTTGCTGCGTTGTTTGGACTGGAGTGTTTTGCATGGGGAACAACTAATTTCCAGCATAAAAATAATGGACAAACTCTTGTGTCAATCCAAATATTGTATATAGTATCGCGCCACACCAGTCGACTATCAAGACTCGAAACAGCCAATAAAAAGGCAAACCCGTGGGACCCATCTCACCCGCGTGTTGCTTTAGCATTTCCTGGCCTTAGTAGTGCGTATGCCACTCATGGGGTTGTGCCACGTGTCGCGGGTGGCATTGGCTGTGGCTGTGTTGGGGGTGGCGGTAACTCAACGCAACCGTTCGCATCCTCATCTAACGTCCCTGATTGGCTTGGCTGTGATTCAACGGCCCTGATCTGCTGA 2247 0.4317 MNGGDEVVAAPAGPPHPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSSRDLERVDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKISEMNVDPSKSMGNGSIASSSNSSSSRPYLANGGSPDRYNYISNDFSFPPGGIPSLRLPMVVVSSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRLATGSYSNLFRVFGCAPGSAEATTLEASKNPMRRLVPTPSRPSRSLGNSITRVVRRGAETPGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYIAEWRLDSAFSSYQFSTNYPFWKSMASKIPQLQSKVNQASQAAKNHGASYYRLLLDQNKHYIQDPPTIEKCQSLAKQLFYTRLASIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWGTTNFQHKNNGQTLVSIQILYIVSRHTSRLSRLETANKKANPWDPSHPRVALAFPGLSSAYATHGVVPRVAGGIGCGCVGGGGNSTQPFASSSNVPDWLGCDSTALIC 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 348 375 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 485 514 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 402 428 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 235 262 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 376 401 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 320 347 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 291 319 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 263 290 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 Pfam WD domain, G-beta repeat 227 263 IPR001680 GO:0005515
Gma13g03152 748 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 513 - -
Gma13g03152 748 Gene3D - 89 528 IPR015943 GO:0005515
Gma13g03152 748 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 233 247 IPR018067 -
Gma13g03152 748 SUPERFAMILY WD40 repeat-like 39 509 IPR036322 GO:0005515
Gma13g03152 748 Pfam Mitochondrial ATP synthase g subunit 551 640 IPR006808 GO:0000276|GO:0015078|GO:0015986
Gma13g03152 748 SMART WD40_4 274 314 IPR001680 GO:0005515
Gma13g03152 748 SMART WD40_4 105 145 IPR001680 GO:0005515
Gma13g03152 748 SMART WD40_4 333 371 IPR001680 GO:0005515
Gma13g03152 748 SMART WD40_4 224 263 IPR001680 GO:0005515
Gma13g03152 748 SMART WD40_4 31 66 IPR001680 GO:0005515
Gma13g03152 748 SMART WD40_4 375 429 IPR001680 GO:0005515
Gma13g03152 748 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 513 IPR000009 GO:0000159|GO:0019888
Gma13g03152 748 MobiDBLite consensus disorder prediction 160 183 - -
Gma13g03152 748 MobiDBLite consensus disorder prediction 157 183 - -
Gma13g03152 748 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03152 Gma-Chr13 45652694 45666110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03152 K04354 - gmx:100790801 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03152 13 45652694 45666110 Gma15g00214 15 1839428 1854520 ECH
Gma15g00214 15 1839428 1854520 Gma13g03152 13 45652694 45666110 ECH
Gma13g03152 13 45652694 45666110 Gma13g03152 13 45652694 45666110 ECH