Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03088 ATGGCGAATCTGGTTCCGGGGGTGCTTCTGAAGCTTCTTCAGCACATGAACTCGGATGTGAAGGTTGGTGGCGAGCACAGGTCTTCGCTTTTGCAAGTTGTGAGCATTGTTCCGGCACTTGCAGCAGGGGGTGAGCTTTTCCCAAACCAAGGTTTTTATCTCAAGGTCTCTGATTCCTCTCATGCTACCTACGTGTCACTCCCTGATGAGCATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTGTTTGTTGATCGCTTGGAGGGTGCTTCTCCCGTTCCCATTCTCAGAGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAGGATATTGTTGCAACTCATTCCCTTGCTTTCCTCGATAATGGTAATGACAAAAATGGGGCTTGTTCTGGTGGGGGTGACGTGGATAGGTCCAAGTCTCCGAGGAAGGTGTTTGGTGGTGGGGTTGGGGAGAAGGAGAAGGAGAAGAAGGAGAGAGTGAGATCAATTGTTGTTGGTGGTGGTGGGAGTGGTAAAGAGGATGTGCAATCCAGCAAGGCAAGTGCTGTTTTCGGTAGGAGCAAATCTCAGCCTCAGCAACCACAGCCAATCAAGCCTGCACTCAAGATTCAGGTCAAGAAGGAATCCTTGGCTAGATTGAAGTCAACCAATTCGCGGTCCATTCCTTCGTCGCCGAGTAGTTGCTACTCGTTGCCGAGTTCTTTTGAGAAATTTGCCAATGGGGTCAGGCAGCACCAGGGAAAGGTTGGGGCTAAGGTGGGAGTGGCGGAGACGGAAAAGGCTGTTCGTGGGGCTAGTAGTTTGGTTGGGAAGAAAATTGTGGTGGGAAATCCGATTAGAAATTTGGTGCAGGGAATTGAGCTGGGGACAAAGGCTCTAAGGAAGAGCTGGGAAGGGAGTATGGAGGTCAAGACTAAAGAGTCTTCCAAAACCAGGGTTGCAACCAAGTTTGATTCTAAGCCTGAAGCAAGTACGCCTAGGAGGAGAAGCATTTCAACTGAAAAGTTTCTATCTAAAGAGGAGAGCAGGATCCAAGCACCAACAAAGCCCTCTAAGGAACAACATAAGATTCAAACACCTACAAAGAAGGCTAATGCTAATGGAATTGTGGAGGAACCAGAAAAGTCTAGTAAGCTAAGAACTTCCATTGGAAAGAAATCAGCTGAAGTTTCTAACAGCGGACTCCCTGGAAACTTGGTCAAAGTTTCTCTAAGTAATAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGATTGGAAGGGAAGTAATGAAACACAGAGATGCGGCACAGATAGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCTGAGAGTTTACTGCAATGTCTAAGAACATATTCAGAGCTAACTAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTGAATAGTACCCGGACAATTGCTGAATCCTTGTCAAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAGGAGCACAGTGGAAGAAGCTCTAAAAGTAAAATCAGATAGACAAAAACAATCGGCTTCCTGGGTCCAGGCAGCCTTGGCCACCAATTTGTCATCATTTGCTGTTTTTACAAGAGAATCTCAATCATCCAAGCTTCCAGCTTCAAGCAATTCTCAAAATCAAAAGACTGTTGTGGGAAGTCAAAACATGTTAGTCCTACACAATTCCAGTGAAGATGCTTCATCAAAAGTTCATGCAAAAACTCGTCTGACAGCTAATTCCAAGCATTCCTCACAAGGAACTCTTCGCAAACCAGGTGATGGGTTATTAAATGGTCAGAAGCAACTAGTGCAACTTCCCCCAGAATGGGTTAGAGGAAATGGTCTCAATGAGGTAGTTAATTTGGCTGAAATGTTACAGTTAGAGTCCCGAGACTGGTTTTTGGGATTTGTTGAGAGGTTCTTGGACAGTGATGGGGACACTACCTTGTCAGATAATGACCAAATAGCAGGTATGCTCACTCAACTAAAGAGTGTTAACGATTGGTTAGATGAGATAGGATCGAGCAAGGATGAGGGAGAATCATGCCAGATATCAACAGAGACAATTGACCGGTTGAGAAAGAAGATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTCAGTGGTGGATCACAATCGTCACCTCAGATCCAAACAACACAAAGTAAAGCCAAAAGGTGA 2271 0.4549 MANLVPGVLLKLLQHMNSDVKVGGEHRSSLLQVVSIVPALAAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEGASPVPILRGVRPVPGRHPCVGTPEDIVATHSLAFLDNGNDKNGACSGGGDVDRSKSPRKVFGGGVGEKEKEKKERVRSIVVGGGGSGKEDVQSSKASAVFGRSKSQPQQPQPIKPALKIQVKKESLARLKSTNSRSIPSSPSSCYSLPSSFEKFANGVRQHQGKVGAKVGVAETEKAVRGASSLVGKKIVVGNPIRNLVQGIELGTKALRKSWEGSMEVKTKESSKTRVATKFDSKPEASTPRRRSISTEKFLSKEESRIQAPTKPSKEQHKIQTPTKKANANGIVEEPEKSSKLRTSIGKKSAEVSNSGLPGNLVKVSLSNRKVTDASVQWASLPSSISKIGREVMKHRDAAQIAATEAMQEAAAAESLLQCLRTYSELTNSAKEHNPQPAVEQFLTLHASLNSTRTIAESLSKPIPDGSSPDYERSTVEEALKVKSDRQKQSASWVQAALATNLSSFAVFTRESQSSKLPASSNSQNQKTVVGSQNMLVLHNSSEDASSKVHAKTRLTANSKHSSQGTLRKPGDGLLNGQKQLVQLPPEWVRGNGLNEVVNLAEMLQLESRDWFLGFVERFLDSDGDTTLSDNDQIAGMLTQLKSVNDWLDEIGSSKDEGESCQISTETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTTQSKAKR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03088 756 MobiDBLite consensus disorder prediction 313 399 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 589 621 - -
Gma13g03088 756 PANTHER EXPRESSED PROTEIN 1 755 IPR010341 -
Gma13g03088 756 PANTHER DUF936 FAMILY PROTEIN 1 755 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 183 206 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 598 613 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 139 209 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 313 368 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 736 756 - -
Gma13g03088 756 MobiDBLite consensus disorder prediction 145 171 - -
Gma13g03088 756 Pfam Plant protein of unknown function (DUF936) 4 737 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03088 Gma-Chr13 45156462 45160911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03088 - - gmx:100817734 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03088 13 45156462 45160911 Gma13g03088 13 45156462 45160911 ECH
Gma13g03088 13 45156462 45160911 Gma15g00274 15 2378717 2382606 GST
Gma13g03088 13 45156462 45160911 Gma12g00452 12 3700990 3705558 PCT
Gma13g03088 13 45156462 45160911 Gma11g01152 11 9700864 9705517 PCT
Gma12g00452 12 3700990 3705558 Gma13g03088 13 45156462 45160911 PCT
Gma11g01152 11 9700864 9705517 Gma13g03088 13 45156462 45160911 PCT