Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03024 ATGCCTCTGCCTGCAGAACGCACGTACAGATATGTTGACACTTCAAGAAGTCCTACCGCCATCATTAGCGTGGAACAATTCCTTCGAGCTACACCAGGAGGGGAGTCTTGTAGGAAGTCACCAACCTACTCTCCCACCTCGTCTTCCCCTTCCTCTCCTTACTTTGAGAAGTTGAAGAACCAAGACCCAGAAGAAGACCATGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTAAAGGAGAGGGCCAGGAAATTCCGCTACAGCCTCAGCAAGAGAAGAATGGATGACGAGAACGTCACACCCTCTTGGGGTGTTAGCTTAGAAGAGGATGAGGAAGAAGAAGACCCTGAATACCTTGGAGCTCCAATGTATGAATCAGAGCTGGCACCTGAGGAATACAAAGAATATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAAGCATGTTTTGCACAACGCTGTCAAATTAGGAGCGGAGCAGGATCAACAGAAGTCACGTGGTGCTGTCAGTGCCAGGTTCACGACAACAACTCCAAACATGACATCTGAAACCACAGCTCAGAAACTGACACCTGTCTATGTTGGAGTGTCAAATGCAGCTAATGCTATATCCTCCAAAATTCAAGCTGTTTCTAGTTCCACAACTGCTCCTGCAGCCAACGACATGTCCTCACATACCTCATCACTTCCATCATCTTCAATGCAAAATTCATCATCCGCTTCCCTGAGTGGGAAGAATACATCTTGCCAAAAGAGTGCTTCTCTAAGAGATAATTTGATGAACCAGTGTGAACAAGGTGATAGAGCCCGAAATGTGCCTACAATGCAAAAATCATCATCCTTATCTGCTTCGATGACTGAGAATAAGAATATTACAAGCCTAATGAGTGCTTCAGTTAAAGATTATTCAATGAACAAGTCTGAGCCAAGGGATGATGCAAAAACTGTGTCTCAGCCTCAGGTGATGATATCTGAAGCAACGAGTCCTAAGAGAACTTCTAGTAATGCAGGTGTGATGGACAAGGTGAGAGGAGCTGTGAATTCATTGCTGGGGAATGAGGAACCATCACAACAATATGGAGTCAAAACTCCTACTACACGCACTTCGTCACAGCAAACTCAACAAGGTAAAGCACTCTCATTATGA 1158 0.4508 MPLPAERTYRYVDTSRSPTAIISVEQFLRATPGGESCRKSPTYSPTSSSPSSPYFEKLKNQDPEEDHGLYQKKSVLTKVKERARKFRYSLSKRRMDDENVTPSWGVSLEEDEEEEDPEYLGAPMYESELAPEEYKEYARQHPRANPVISEKHVLHNAVKLGAEQDQQKSRGAVSARFTTTTPNMTSETTAQKLTPVYVGVSNAANAISSKIQAVSSSTTAPAANDMSSHTSSLPSSSMQNSSSASLSGKNTSCQKSASLRDNLMNQCEQGDRARNVPTMQKSSSLSASMTENKNITSLMSASVKDYSMNKSEPRDDAKTVSQPQVMISEATSPKRTSSNAGVMDKVRGAVNSLLGNEEPSQQYGVKTPTTRTSSQQTQQGKALSL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03024 385 MobiDBLite consensus disorder prediction 269 290 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 58 73 - -
Gma13g03024 385 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 379 IPR037491 GO:0009737
Gma13g03024 385 MobiDBLite consensus disorder prediction 37 56 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 308 385 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 321 339 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 354 385 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 88 120 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 161 186 - -
Gma13g03024 385 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 1 379 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 167 186 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 30 73 - -
Gma13g03024 385 MobiDBLite consensus disorder prediction 220 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03024 Gma-Chr13 44664459 44666214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03024 - - gmx:102664483 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03024 13 44664459 44666214 Gma15g00336 15 2896230 2898260 GST
Gma13g03024 13 44664459 44666214 Gma12g00532 12 4417769 4419854 PCT
Gma13g03024 13 44664459 44666214 Gma11g01233 11 10499039 10501027 PCT
Gma12g00532 12 4417769 4419854 Gma13g03024 13 44664459 44666214 PCT
Gma11g01233 11 10499039 10501027 Gma13g03024 13 44664459 44666214 PCT