Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02949 ATGGAGGCAGCTCAGAGAAGATTGGGAGGAGGAATGGTGCCGTTGTCGCCGTCACAGACTCCGCGCTCCAGCGATAAGCCCGTGCGAGATCTGCGATCTGCGGATTCCAATTCCAACAGTCACAGCAAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAGGCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTGTAACGAAGGTAGAAGAGAGGTTTTAGCTGTTCAGAATATCGCCAACAAACAGATCGATAGAACCTTCGCATTTGACAAGGTGTTTGGTCCTAACTCTCAACAGAAAGAACTGTATGATCAGGCAGTGTCTCCAATTGTGTATGAAGTGCTTGAGGGCTATAACTGCACTATTTTTGCGTATGGACAGACCGGGACAGGGAAGACATACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGCGAATTTCCGAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAACAGATTTTTGATATATTGGAAGCTCAGAATGCTGAGTATAACATGAAAGTAACATTTCTAGAGCTTTACAATGAGGAAATAACAGATCTTTTGGCCCCTGAGGAAACTTCGAAATTTATAGATGATAAGTCTAGGAAACCTATTGCTCTAATGGAGGACGGGAAGGGGGGTGTTTTTGTCAGGGGCTTGGAAGAAGAGATTGTTTGCACTGCAAATGAAATTTACAAGATATTAGAAAAAGGTTCTGCAAAGAGGCGTACAGCTGAGACTCTTCTTAACAAACAAAGCAGCCGTTCTCACTCCATATTTTCTATCACAATTCATATTAAGGAATGCACTCCAGAGGGTGAGGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTCGCAGGGTCTGAGAATATTTCACGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAACAAAAGCTTGCTTACACTTGGACGAGTGATTAATGCGCTAGTTGAGCACTCAGGTCATGTTCCATATAGGGATAGCAAATTAACCAGATTGTTGAGGGATTCTTTGGGTGGTAAAACCAAAACGTGCATTATTGCCACAATATCCCCTTCCATTCACTGTCTGGAAGAAACTCTTAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATTAATCAGAAAATGATGAAATCTGCAATGATTAAGGATTTGTATTCTGAAATTGACAGACTAAAGCAAGAGGTGTATGCAGCAAGAGAGAAGAACGGAATCTATGTACCACGTGATCGCTACCTTCACGAAGAAGCAGAGAAGAAGGCCATGACTGAAAAGATAGAACGCATGGAACTAGAAGCAGAGTCTAAGGATAAGCAACTAGTGGAGCTTCAAGAACTCTACAACTCCCAGCAACTTTTGACTGATGAATTGAGTGTTAAACTTGAAAAAACTGAGAAAAGTCTAGAAGAAACTGAGCAGTCATTGTTTGATCTTGAGGAAAGGCACAAACAAGCAAATGCAACAATCAAGGAAAAGGAATTTTTGATATCAAATCTCCTAAAATCTGAGAAAGCACTTGTGGAGCGTGCAATTGAACTGCGAGCAGAACTCGAGAATGCTGCATCAGATGTGTCAAACCTCTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCAACAACTTGAAGTGTTGCACAAGACAGTTTCAGCTTCAGTAATGCATCAAGAGCAGCAACTGAAGGACATGGAGGACGATATGCAGTCTTTTGTATCAACGAAAGCAGAGGCTACTGAAGATCTTAGACAACGGGTAGGAAAGTTGAAAAACATGTATGGTTCTGGTATCAAAGCTCTGGATGATTTAGCTGAGGAGCTTAAAGTAAATAACCAGTTAACTTATGATGACTTGAAATCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGGATCTTTTTAAAGGAATCGCCTTAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCCACAAGCAAGAAGCCAATTTAACAGCTTATGCTCATCAACAAAGAGAGTCGCATGCCAGAGCAGTGGAGACTACACGGGCAGTATCTAAAATAACAGTGAACTTTTTTGAGACAATCGACAGGCATGCATCGAGTCTGACCGAAATTGTGGAAGAAGCACAATTGGTCAATGATCAGAAATTGTGTGAACTTGAGAAGAAGTTTGAGGAGTGTACTGCCTATGAAGAAAAACAACTACTGGAGAAAGTGGCAGAAATGCTAGCAAGTTCAAATGCTAGAAAGAAACAATTGGTTCAAATAGCAGTCAATGATCTTCGAGAAAGTGCAAATTGTAGAACCAGTAAACTGCGGCAAGAAGCATTAACCATGCAGGAATCTACTTCTTCTGTCAAGGCTGAATGGAGAGTTCACATGGAAAAAACAGAATTCAACTATCATGAGGATACTTCCGCTGTAGAATCTGGGAAGAAAGACCTTGTAGAGGCTCTTCAAATCTGCCTCAACAAGGCAAAAGTAGGTTCACAACAATGGAGAAAAGCTCAAGAATCTTTGCTTAGTTTGGAGAAGAGAAATGCTGCTTCTGTGGATACTATTGTTAGGGGAGGAATGGAAGCTAATCAAGCTCTACGTGCCCGATTCTCAAGTGCTGTATCAACTACACTTGAAGATGCAGGAATAGCAAACAAGGATATTAACTCATCCATTGATCATTCGTTGCAACTTGATCATGAAGCTTGTGGGAATCTGAACTCTATGATCATTCCGTGCTGTGGTGATTTGAGAGAACTGAAGGGTGGTCATTTCCACAGTATTGTGGAGATAACTGAAAATTCAGGGAAATGTCTTCTCAACGAATACATGGTCGACGAACCATCTTGTTCAACACCAAGAAAGAGACTCTTCAATTTACCTTGTGTTTCATCCATAGAAGAACTAAGAACCCCATCATTTGAGGAATTGTTGAAGTCATTCTGGGATGCAAGATCTCCGAAACAAGCAAATGGAGATGTTAAACACATCGGGGCATATGAAGCCGCTCAATCAGTGAGAGATTCCAGAGTCCCTCTCACTGCTATTAATTAA 3156 0.4167 MEAAQRRLGGGMVPLSPSQTPRSSDKPVRDLRSADSNSNSHSKYDKDKGVNVQVLVRCRPLSEDETRLHTPVVISCNEGRREVLAVQNIANKQIDRTFAFDKVFGPNSQQKELYDQAVSPIVYEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYNMKVTFLELYNEEITDLLAPEETSKFIDDKSRKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYVPRDRYLHEEAEKKAMTEKIERMELEAESKDKQLVELQELYNSQQLLTDELSVKLEKTEKSLEETEQSLFDLEERHKQANATIKEKEFLISNLLKSEKALVERAIELRAELENAASDVSNLFSKIERKDKIEEGNRILIQKFQSQLAQQLEVLHKTVSASVMHQEQQLKDMEDDMQSFVSTKAEATEDLRQRVGKLKNMYGSGIKALDDLAEELKVNNQLTYDDLKSEVAKHSSALEDLFKGIALEADSLLNDLQSSLHKQEANLTAYAHQQRESHARAVETTRAVSKITVNFFETIDRHASSLTEIVEEAQLVNDQKLCELEKKFEECTAYEEKQLLEKVAEMLASSNARKKQLVQIAVNDLRESANCRTSKLRQEALTMQESTSSVKAEWRVHMEKTEFNYHEDTSAVESGKKDLVEALQICLNKAKVGSQQWRKAQESLLSLEKRNAASVDTIVRGGMEANQALRARFSSAVSTTLEDAGIANKDINSSIDHSLQLDHEACGNLNSMIIPCCGDLRELKGGHFHSIVEITENSGKCLLNEYMVDEPSCSTPRKRLFNLPCVSSIEELRTPSFEELLKSFWDARSPKQANGDVKHIGAYEAAQSVRDSRVPLTAIN 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02949 1051 Gene3D Kinesin motor domain 47 433 IPR036961 -
Gma13g02949 1051 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma13g02949 1051 SMART kinesin_4 49 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 ProSiteProfiles Kinesin motor domain profile. 51 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 Coils Coil 527 561 - -
Gma13g02949 1051 Coils Coil 601 621 - -
Gma13g02949 1051 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1051 - -
Gma13g02949 1051 PANTHER KINESIN-LIKE PROTEIN KIN-5D 1 1051 - -
Gma13g02949 1051 MobiDBLite consensus disorder prediction 1 46 - -
Gma13g02949 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 433 IPR027417 -
Gma13g02949 1051 Coils Coil 409 429 - -
Gma13g02949 1051 Pfam Kinesin motor domain 57 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02949 1051 Coils Coil 439 473 - -
Gma13g02949 1051 Coils Coil 481 515 - -
Gma13g02949 1051 CDD KISc_BimC_Eg5 49 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02949 Gma-Chr13 44057636 44064272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02949 51 423 Miscellaneous Gene Families AT5G06670 38.259 1.73e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02949 K10398 - gmx:100818630 2007.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02949 13 44057636 44064272 Gma13g02949 13 44057636 44064272 ECH
Gma13g02949 13 44057636 44064272 Gma15g00414 15 3466589 3472528 GST
Gma13g02949 13 44057636 44064272 Gma12g00660 12 5654036 5659744 PCT
Gma12g00660 12 5654036 5659744 Gma13g02949 13 44057636 44064272 PCT