Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02886 ATGCTTGCTACCTTGGTTTTGATTTGCTGTTTATTTACGGCATTTCTATTCCTCTCCTTACCTGTTATGTCTCAAGAAGTTGAAGATGAGAGCGAGTTTAGTTACGACGAAAAGAGCGAGAATggaccatctaattggggagacatacaccccgaatggagtttgtgcaacaatggatccatgcaatcgcctattgatctattgaatgagagggttcaaatagtatcccatctagggaggcttcagatgaactaccaaccctctaatgccactattaagaataggggccacgacatcaagctagaatgggttgctggcgcaggctatcttcaaattaatgaaactgagtacgtactcaaacaatgtcattggcattctccctctgaacacaccatagatggcaaaagGCTTGATCTAGAGTTACACATGGTGCATGAAACTCCATCAGGACAATCTGCTGTGATTGGAATGCTCTACAAGATTGGAAGTCCAGATTCTTTCTTGTCATCGTTAACGGATCATTTAAAGGCCATTTCTGATACAACGGAAGCAGAAAGAGTGGTGGGTGTAGTTGACCCTAGGCAGATAAAAATATTCTACAAGCAGTATTACAGGTATATAGGTTCACTGACAATTCCTCCTTGCACCGAGAATGTTTCTTGGACCATCATTAGAAAGATACAATCCGTTTCAAAGGAACAAGTTAGATTGCTTCGAGTCGCTGTTCATGATGAATCAGATACTAACGCAAGGCCACTGCAACTAATAAATAACCGCTTGGTGAAACTCTATGGGCGAAAATATACTATTAAAGATAAACATTGA 825 0.2582 MLATLVLICCLFTAFLFLSLPVMSQEVEDESEFSYDEKSENGPSNWGDIHPEWSLCNNGSMQSPIDLLNERVQIVSHLGRLQMNYQPSNATIKNRGHDIKLEWVAGAGYLQINETEYVLKQCHWHSPSEHTIDGKRLDLELHMVHETPSGQSAVIGMLYKIGSPDSFLSSLTDHLKAISDTTEAERVVGVVDPRQIKIFYKQYYRYIGSLTIPPCTENVSWTIIRKIQSVSKEQVRLLRVAVHDESDTNARPLQLINNRLVKLYGRKYTIKDKH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02886 274 CDD alpha_CA_prokaryotic_like 42 263 IPR041891 -
Gma13g02886 274 Pfam Eukaryotic-type carbonic anhydrase 41 262 IPR001148 -
Gma13g02886 274 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 265 IPR001148 -
Gma13g02886 274 PANTHER CARBONIC ANHYDRASE 20 264 IPR023561 GO:0004089|GO:0008270
Gma13g02886 274 SUPERFAMILY Carbonic anhydrase 32 261 IPR036398 -
Gma13g02886 274 Gene3D Alpha carbonic anhydrase 29 271 IPR036398 -
Gma13g02886 274 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 20 264 - -
Gma13g02886 274 SMART Carb_anhydrase_2a 35 265 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02886 Gma-Chr13 43423844 43426326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02886 K01674 - gmx:100810249 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02886 13 43423844 43426326 Gma13g02886 13 43423844 43426326 ECH
Gma13g02886 13 43423844 43426326 Gma12g01658 12 36813003 36814879 GST
Gma11g01623 11 17502257 17504779 Gma13g02886 13 43423844 43426326 PCT