Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02542 ATGGCGCCGAAGCACGACAACTGCTGCTCGCGCTGCATCGGCTTCCTAATAGCCATAGGCCTCACTGCGCTCTTCCTCTGGCTGAGTCTCCGCGTGGACGAACCTAAATGCTACCTCGACTACATTTACGTTCCTGCCCTCAACAAAACCCTAAATTCCAGTTCAAATTCCACTCACAACAAAAACGCCACAATAGTCTTCGCTCTCAAGCTCGCCAATGAGAACAAGGACAAGGGCATCCAATACGACGACGTTCTCCTCTCCTTCAGAGTCTTCGAGAGCGTGAACACCACGCGCCCCCTCGGCAACGCCACCGTGGAAAGGTTCTACCAGGGCCACAAGAAGAAGGCCACCAAGCGCGGAAACTTCACCGTCGGAGGTGGCGGCGGAAACCTCACGGCGGCGCTGGATGGGAAAGTGTGGTACCGTGTGGACTATGCTACTGCGGTGAAGTACAAGATTATTTTCTGGTACACGAAACGGCACCGTTTGTGGGGAGGGGCAAATGTGGAAATTGGTGAATTGGGAACGAAGGTGAATCGTAAAGCCGTTAGACTTGGAGGGAAGAACCCCGTGGTGATCGAGTCCGGCGCATCGAAGCTCAGTGGACGCTATCGTGCGCCTCTTCTTCTCCCTTTTGCTTATCTCCTGGCTTGTGGGCTTAGTTGA 669 0.5426 MAPKHDNCCSRCIGFLIAIGLTALFLWLSLRVDEPKCYLDYIYVPALNKTLNSSSNSTHNKNATIVFALKLANENKDKGIQYDDVLLSFRVFESVNTTRPLGNATVERFYQGHKKKATKRGNFTVGGGGGNLTAALDGKVWYRVDYATAVKYKIIFWYTKRHRLWGGANVEIGELGTKVNRKAVRLGGKNPVVIESGASKLSGRYRAPLLLPFAYLLACGLS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02542 222 PANTHER NDR1-LIKE PROTEIN 5 217 - -
Gma13g02542 222 PANTHER OS05G0367900 PROTEIN 5 217 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02542 Gma-Chr13 40276058 40277191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02542 - - gmx:100804737 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02542 13 40276058 40277191 Gma13g02542 13 40276058 40277191 ECH
Gma13g02542 13 40276058 40277191 Gma12g02016 12 40821827 40822913 GST
Gma13g02542 13 40276058 40277191 Gma06g02477 06 47254796 47255479 PCT
Gma06g02477 06 47254796 47255479 Gma13g02542 13 40276058 40277191 PCT