Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02534 ATGCAGCTGCACATATCTCCAAGTTTGAGGCATGTTACTGTGTTTCCAAGTAAAGGGTTCAAGGAGTTTATCAAAGTGAAGGTTGCATCGAAGCGTGTCTCGTATCGGATGCTCTTCTACTCACTCTTGGTCTTCACTTTTCTTCTCCGGTTTGTGTTTGTCTTAACAGCAGTGGATGGCATTGATGGAGAAAACAAATGTACTACCATAGGTTGCCTAGGAAAAAAACTAGGACCTAGGATTTTGGGAAGACGGCCTGAGTCATCTGTCCCAGAAGTGATATACCAAACATTAGATGAAAATCTTGGCAAAAATGAACTTCAAGGAAGATCTGATATTCCACAGACCTTAGAAGAGTTCATGACTGACATGAAGAAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTTCGAGAAATGGTAACCCTTATGGAGCAAAGGACCAGGATGGCCAAAATCCAAGAATATCTATATCGACATGTAGCATCAAGCAGCATACCAAAACAACTTCACTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAACGCAGCAGCACGCCTTCAGCTCCCCTCTGCTGAACTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTGCTGGCTGCATCTGTGGTTGCAACATCGCTTGTTCACAACTTTTTGAGACCTCAGAAGGTTGTTCTGCACATAATTACAGATAGGAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATTCTTTGTCACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTACCTGTTTTGGAAGCTATGGAGAAAGATCAAAAGGTGAGGTCACAATTTAGAGGGGGGTCATCAGCTATAGTTGCAAATACCACTGAGAAGCCAAAAGTTATTGCAGCAAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCCGGATACATCTCCCAGAGTTGTTCCCAAGTCTTAACAAGTTGGTCTTCCTCGATGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGACATTGAAATGAATGGAAAAGTAAATGGCGCTGTAGAAACATGCAGTGGAGAAGATAGGTTTGTGATGTCAAAGAGGTTAAAGAGCTATTTGAACTTCTCCCACCCTCTAATATCTGAAAATTTTCATCCCAACGAATGTGCCTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATGTTTACCATTACTGGGTTGAACAGAATATCAAATCAGACCTAAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAGGAAAATACAAGTTTTGGTGATGCTGAGAGTGCTGGTGTCGTCCATTTCAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCACAACTAAGGAAATTGTGGACAAAGTATGTTGACTTCTCAGATAAGTTCATCAAGAGTTGTCACATTAGGGCATCATAG 1602 0.4238 MQLHISPSLRHVTVFPSKGFKEFIKVKVASKRVSYRMLFYSLLVFTFLLRFVFVLTAVDGIDGENKCTTIGCLGKKLGPRILGRRPESSVPEVIYQTLDENLGKNELQGRSDIPQTLEEFMTDMKKGGYDAKTFAVKLREMVTLMEQRTRMAKIQEYLYRHVASSSIPKQLHCLSLSLANEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVHNFLRPQKVVLHIITDRKTYYPMQAWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKLVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCSGEDRFVMSKRLKSYLNFSHPLISENFHPNECAWAYGMNIFDLEAWRKTNISNVYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFGDAESAGVVHFNGRAKPWLEIAFPQLRKLWTKYVDFSDKFIKSCHIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02534 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Gma13g02534 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Gma13g02534 533 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
Gma13g02534 533 CDD GT8_like_1 207 519 - -
Gma13g02534 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Gma13g02534 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02534 Gma-Chr13 40210474 40215746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02534 1 533 Glycosyltransferase AT5G54690 78.318 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02534 K20867 - gmx:100802623 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02534 13 40210474 40215746 Gma13g02534 13 40210474 40215746 ECH