Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02523 ATGGCAGCCATGGCTGCGCTTCAGAGCTCAATGGTCGGTCTCTCCCTCTCCTCCAACTCTTTCTTAGGCCAACGCCTTTCTCCCATCACCCTCCCCTCTCTTCTTCCGGGTAAGTCAACAGAGAAGCAATGTCCTATTGTAATGAGGCTTAAACGATGGGAACGGAAGGAGTGTAAACCAAACAGCCTTCCTATCTTGCACAAAATGCATGTTAAACTTGGAGATACGGTGCAAGTCATATCTGGACGTGAAAGGGGTAAAGTTGGGGAGATTACTAAAATCTTCAAGCATAACAGCACTGTTATAGTGAAAGATTTAAATTTGAAGACAAAGCATGTGAAGAGTAGAGAAGAGGGGGAACCAGGGCAAATTATTAAGATTGAAGGTCCTATCCACAGCTCAAATGTGATGCTCTACTCCAAAGATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAAAAAAGTCCGCTACCTTATAAAAACTGGTGAAATAATTGATAGTGCAGAGAACTGGAAGAAACTGAAGGAGGCTACTAAGCAAACTGAAGAAGCTACTGCTGCTGCTGCCTAG 585 0.4427 MAAMAALQSSMVGLSLSSNSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGEPGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDSAENWKKLKEATKQTEEATAAAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02523 194 Hamap 50S ribosomal protein L24 [rplX]. 69 165 IPR003256 GO:0003735|GO:0005840|GO:0006412
Gma13g02523 194 Pfam KOW motif 74 104 IPR005824 -
Gma13g02523 194 SMART kow_9 70 97 IPR005824 -
Gma13g02523 194 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 4 193 IPR003256 GO:0003735|GO:0005840|GO:0006412
Gma13g02523 194 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 106 170 IPR003256 GO:0003735|GO:0005840|GO:0006412
Gma13g02523 194 SUPERFAMILY Translation proteins SH3-like domain 67 169 IPR008991 -
Gma13g02523 194 TIGRFAM rplX_bact: ribosomal protein uL24 68 170 IPR003256 GO:0003735|GO:0005840|GO:0006412
Gma13g02523 194 CDD KOW_RPL26 74 138 IPR041988 GO:0003723
Gma13g02523 194 ProSitePatterns Ribosomal protein L24 signature. 74 91 IPR005825 GO:0003735|GO:0005840|GO:0006412
Gma13g02523 194 Gene3D - 64 169 IPR014722 -
Gma13g02523 194 PANTHER 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC 4 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02523 Gma-Chr13 40143284 40146427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02523 K02895 - gmx:100306643 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02523 13 40143284 40146427 Gma13g02523 13 40143284 40146427 ECH
Gma13g02523 13 40143284 40146427 Gma12g02034 12 40966234 40969415 GST