Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02464 ATGAGGGGCCCTTTGGGTGCAGTCATAGGAAGGTACCCTTCAAGTGATGGAACCACTCATTTGGGTGGCATCATAAGGCACAACAGAAAATGCAGAGACATAGCCTTTCTTGTTATCTTTGTAGCATTTTGGATTGCCATGATTGTCAACTCCAGCTTTGCTTTCAACAGAGGAAACCCATTGAGGCTTACTTATGGGTTGGACTACAAAGGAAATGTGTGTGGGCAAAAGCATGCAGTTCAAGATCTTCGAGAATTGGAGCTCAGATACTGGCTAAGTCCTAATCAGGTTTATCAAAGTGGATTGAAGGATAGCCAATTCAAACTGGTCAATGCCCGCAGTATATGCTTGCTCGACTGCCCCATACCTTCTGAAGATTCACTTACTTGGGTGTGTGATTATCCTGAAGGAGATATTCACGTTTCATTGAATGATTGGATTGATATGAACTACGATTATTTTGAGTTCCTTACGCCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCTTGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTCATTGCTAAAGCATCAAATGTATCTTTAAAGCATTGGCAGCAGATGGGTGGAGTTACCATCAATGAAAACATTGTTATTGACAAGTCCATTCACAAGTATATCAATTCTCATTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCATGGCTTGTGCTGATTGTTTGTGGAGGGATTTTACCTCTGTTTGTGTCTGTGATTTGGCTGCTGATGATTCGGCATTTTGTTGCTGCCATGCCTTGGGTGACAGTGGTTTTGTTTGATGTTCTAATAATATCAGTTACAATGTTTTTCTACCTCAAAGTTGGCTGGATAGGAAATGATGCTATTTCCCCCATCATAGGTGAGCATGATCCTTACATTCATGTATTTGTGAGGGAGCTTACTCATCTACGAGTTGTCACTGTCCTTATGACCTTTATCATGCTTGTTGCCATTCTTACATCAATTGCTGTTGTTCGGCGCATCCTTATGGCAACTTCTGTCCTTAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCGAGCACTTATTATTTTTCCAATCATACCATATGGTATTCTTGCAGTGTTCTACATGTTATGGATTTCTGCTGCTCTTCATTTGTTTAGCTCTGGTCGGGTTGTTCAGAATAACTGCAACTCTAACTGCTGCACATATGACCTCTTGGAAAAAAGGGTGATCTGTGATCAGTGTTGTGGATATAGCATTCGTTACACACCGCATATTGGAGTTGCCATCCTTTTTCACTTATTTGGCTGTTATTGGGCTACACAATTTTTCATAGCTTGCTCATCAACAGTGATTGCTGGATCTGTTGCCTCTTACTATTGGGCCCATGGTGAAGCATCTCCTGAAATTCCTTTTCTTTCAGTCTTTTCCTCCATGAAGAGGCTTATGCGTTACAGTCTTGGTTCTGTGGCTCTTGGCTCTCTGACTGTATCATTTGTAGAGTCAATCCGCTTTCTGCTTGAATCTATTCGCCGGAAACTAAAAGGCTCTAGTCACATGCCTGATAGCTGGATTGACAAGGCTGCTTACCAATCTTCTCAATGCTTTCGAAGGTGTATTGAGTGGACCATCAAATCAGTGAACCGAAATGCTTACATCATGATTGCTATAACGGGTAAAAGTTTCTTTAGAGCTTCTGCTATTGCAACAGAATTGATCATGAATAACATCCTACGGATTGGGCATGTTAACGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTCAGCCTCTCAAGTGCTGTTTTTGCTTTCCTCATGTTAGACACACACAACTACAGTTCTGCACATAACAAGATCTCATCTCCACTATTACCTGTTGTGGTTTGCTGGGCTCTTGGATATATTGTTGCAACTCTTTTCTTTGCAGTTGTAGAGATGTCAATTGACACCATCATTCTCTCATTCTGCCAAGACTCTGAAGAGCATGGAACAGCACATTATGCTCCACCGCTTCTCATTGAAACTCTGGGAGACCAAAATGATATGCAGAGACTTACACAAGGACCCCAATGA 2100 0.4138 MRGPLGAVIGRYPSSDGTTHLGGIIRHNRKCRDIAFLVIFVAFWIAMIVNSSFAFNRGNPLRLTYGLDYKGNVCGQKHAVQDLRELELRYWLSPNQVYQSGLKDSQFKLVNARSICLLDCPIPSEDSLTWVCDYPEGDIHVSLNDWIDMNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIAKASNVSLKHWQQMGGVTINENIVIDKSIHKYINSHSAVLKRYMADIGKAWLVLIVCGGILPLFVSVIWLLMIRHFVAAMPWVTVVLFDVLIISVTMFFYLKVGWIGNDAISPIIGEHDPYIHVFVRELTHLRVVTVLMTFIMLVAILTSIAVVRRILMATSVLKVAAKVIGEVRALIIFPIIPYGILAVFYMLWISAALHLFSSGRVVQNNCNSNCCTYDLLEKRVICDQCCGYSIRYTPHIGVAILFHLFGCYWATQFFIACSSTVIAGSVASYYWAHGEASPEIPFLSVFSSMKRLMRYSLGSVALGSLTVSFVESIRFLLESIRRKLKGSSHMPDSWIDKAAYQSSQCFRRCIEWTIKSVNRNAYIMIAITGKSFFRASAIATELIMNNILRIGHVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHNYSSAHNKISSPLLPVVVCWALGYIVATLFFAVVEMSIDTIILSFCQDSEEHGTAHYAPPLLIETLGDQNDMQRLTQGPQ 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02464 699 Pfam Plasma-membrane choline transporter 327 669 IPR007603 GO:0022857|GO:0055085
Gma13g02464 699 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 696 - -
Gma13g02464 699 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 696 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02464 Gma-Chr13 39436897 39443682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02464 K15377 - gmx:100779959 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02464 13 39436897 39443682 Gma13g02464 13 39436897 39443682 ECH
Gma13g02464 13 39436897 39443682 Gma12g02097 12 41760920 41769049 GST