Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02458 ATGGAGGAAGAGCAGGAGCTTAAGATCCCCGAAACCATCATCTACGACACTATCGGTCCCCTCGCTCTCTCAGCCGTCGACGATTCTCCACTTTCCGACCACCTCGAACCCATCGCCGTTTTCCGCAACGAGATTTCCCTCGAAACGCCCCAACGCGCCTCGCCCGCCTCCGCCGCCGTCGATTTCTTCTCCCTTGATGTCGCCGCCGACGCCTCCGCCCGCGACCCCTTCCCCGAGTTGCTCGCCGCTGCCCCCGAACCGATGACGCCAGCTCCCGCGCCCGAGCCAAAGCTCGAGAGTGGCTGGTTCCACGGGAATTGCAAATTCAAGAGTCCCATGCTTCAACTGCATAAGGAGATAGTGGACTTTTGTGCGTTTTTGTCGCCAACTGCAGAAGAGAAAGCTGCACGAGACTTGGCTATAGAGTCTGTGTTTGGAGTTGTAAAACATATATGGCCTCACTGCCAGGTGGAGGTGTTCGGGTCTTTCAGGACAGGGCTGTATCTTCCGACAAGTGATGTTGATGTTGTCATTTTGAAATCAGGCTTGCAAAATCCGCAAATTGGCTTGAATGCAATTTCTAAAGCATTGTCACAAAGGGGCATGGCAAAAAAGATTCAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAGGAGTGGTATTGCATTTGATATAAGTTTTGATATAGACAATGGACCCAAAGCAGCTGAGTATATCCAGGAAGCAGTGGTTAAGTGGCCACCACTAAGGCCCTTGTGTTTGATTTTGAAAGTATTTTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTACCATGCTGATGGCAATGTTGCGGAATCTTCGCCTGAGCCAAGCTTCTGCTGAGCACAACCTGGGAGTTCTTTTgGTTCATTTTTTTGATTTCTATGGACGCAAATTGAACACCTCAGATGTTGGTGTGTCGTGTAATGGGACAGGCACCTTTTTCGTGAAGAGTAGTAAAGGgtttttaaacagaggacgaccaagtcttattgccattgaggatccacaggcaccagagaatgacattgggaagaactcctttaattatttccagGTTAGGTCAGCTTTTTCAATGGCTTTAAAAAATTTGACAGATGCCAAGATCATCACGAGCCTGGGACCTAACAGGAGCATTCTCGGCACTATAATTAGACCAGATCCTGTCTTGCTGGAGCGTAAAGGCGGGTTGAACGGGGATGTGACTTTTGATAAGTTGCTTCCTGGTGCTGGTGAGCCGTTACAACAACAATATGGAGATGAGGATATGTTATGTAATTGGCAGTTAGATTATGAAGAAGAACCACTACCGCGCGGAGTCAACACCAGTGCAGAGCCTAGCACGCGTTCTTCAACAAAGAAGAGAAAATCTTCGTCAAAGAAGTCCAGTAAGAAGCTAAAGGAAAATGGGGATTTACAGATGGTCAGGAACGAAGAGAATGACTCTAGAAAAGAAAACAGTAAAAAGAAGAGAAGAAAGAAAAAAACACACCAAGGTGACAGCGGTTATTAG 1575 0.4444 MEEEQELKIPETIIYDTIGPLALSAVDDSPLSDHLEPIAVFRNEISLETPQRASPASAAVDFFSLDVAADASARDPFPELLAAAPEPMTPAPAPEPKLESGWFHGNCKFKSPMLQLHKEIVDFCAFLSPTAEEKAARDLAIESVFGVVKHIWPHCQVEVFGSFRTGLYLPTSDVDVVILKSGLQNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGIAFDISFDIDNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNLRLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFVKSSKGFLNRGRPSLIAIEDPQAPENDIGKNSFNYFQVRSAFSMALKNLTDAKIITSLGPNRSILGTIIRPDPVLLERKGGLNGDVTFDKLLPGAGEPLQQQYGDEDMLCNWQLDYEEEPLPRGVNTSAEPSTRSSTKKRKSSSKKSSKKLKENGDLQMVRNEENDSRKENSKKKRRKKKTHQGDSGY 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02458 524 PANTHER POLY(A) RNA POLYMERASE 89 515 IPR045862 GO:0004652|GO:0031499|GO:0043631
Gma13g02458 524 SUPERFAMILY PAP/OAS1 substrate-binding domain 252 393 - -
Gma13g02458 524 CDD NT_PAP_TUTase 136 246 - -
Gma13g02458 524 Gene3D - 111 387 - -
Gma13g02458 524 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 89 515 - -
Gma13g02458 524 MobiDBLite consensus disorder prediction 484 507 - -
Gma13g02458 524 Gene3D Beta Polymerase, domain 2 129 237 IPR043519 -
Gma13g02458 524 SUPERFAMILY Nucleotidyltransferase 112 264 IPR043519 -
Gma13g02458 524 Pfam Nucleotidyltransferase domain 147 245 IPR002934 GO:0016779
Gma13g02458 524 MobiDBLite consensus disorder prediction 456 524 - -
Gma13g02458 524 Pfam Cid1 family poly A polymerase 304 362 IPR002058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02458 K03514 - gmx:100811320 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02458 13 39386781 39393119 Gma13g02458 13 39386781 39393119 ECH