Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02441 ATGGTGGCAAGTTCTAGTTCAGAAGGAACAGGAGTACCCCTATTGAGAGCATCTGATAATAATGGAAGAGATCAAAACACAAGATCCCCCCAAGCTGAGGGATGGTGGAACAAAGTGTTGGACATGGAAGAGGCCAAGCACCAACTCTTGTTTTCACTGCCAATGATTCTTACCAACTTGTTCTATCACTTGATCATTTTGGTTTCTGTCATGCTTGTTGGTCACCTTGGTGAGCTTCAGCTTGCTGGTGCTACTCTTGCAAATTCATGGTTCAGTGTCACTGGCGTGGCAGTTATGGTTGGTTTGAGTGGGGCACTGGAAACACTCTGCGGACAAGGATTTGGTGCAAAGGAATACCAAATGCTGGGAATTTACCTACAAGCCTCTTGCATCATATCTCTTATTTTTTCAATCATTATATCCATTATTTGGTTCTATACAGAACCCATCCTAGTGTTGCTTCATCAATCTCCCGACATTGCAAGAACAGCTGCACTTTATATGAAGTTTCTTATCCCGGGAGTGTTTGCTTATAGCTTCTTGCAAAACATCTTGAGGTTTCTCCAGACACAATCTGTAGTAATTCCATTGGTTGTACTCTCTGCTCTTCCAATGCTGGTTCATATTGGTGTTGCATATGGCTTGGTTCAGTGGTCAGGTCTGAGTTTTACAGGTGCACCAGTTGCTGCTTCTATTTCACTATGGATATCATTGCTATTATTGGCCTTGTATGTAATGTATGCTAAGAAGTTCAAGCAGACATGGAAAGGATTTTCAACGCATTCATTTCGTTACGTATTTACAAACATGAGACTAGCTCTGCCCTCTGCTGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTTTTGGTTTTCTTAGCTGGACTAATGCCCGACTCACAGATAACCACTTCGTTGATTGCAATATGTATAAACACAGAATTCATTGCCTACATGATCACTTATGGTCTCAGTGCAGCTGCAAGCACAAGGGTATCCAATGAATTGGGAGCAGGCAACCCGGAACGAGCTAAACATGCGATGAGTGTCACACTGAAGCTCTCTCTCCTCCTTGGATTATGTTTTGTTTTGGCACTTGGATTTGGTCACAATATCTGGATTCAGTTTTTCAGCGACAGTTCTACAATTAAAAAGGAGTTTGCTTCAGTGACACCCTTGCTTGCCATTTCTATATTACTTGATGCCATCCAAGGTGTCTTGTCAGGGGTGTCCAGAGGATGTGGCTGGCAGCACTTGGCTGCTTACATTAACCTTGCTACATTTTATCTTATTGGTTTGCCAATATCATGTTTCCTAGGATTTAAGACCAATTTGCAGTACAAGGGTTTATGGATTGGTCTGATTTGTGGGTTACTTTGTCAAAGTGGGACTCTCTTCCTTTTCATAAGGCGTGCCAAATGGACTAAATTGGATCTCTCTAGGGACAATGATAAAGAACGGCCTCTTGTTGTTTAA 1476 0.4214 MVASSSSEGTGVPLLRASDNNGRDQNTRSPQAEGWWNKVLDMEEAKHQLLFSLPMILTNLFYHLIILVSVMLVGHLGELQLAGATLANSWFSVTGVAVMVGLSGALETLCGQGFGAKEYQMLGIYLQASCIISLIFSIIISIIWFYTEPILVLLHQSPDIARTAALYMKFLIPGVFAYSFLQNILRFLQTQSVVIPLVVLSALPMLVHIGVAYGLVQWSGLSFTGAPVAASISLWISLLLLALYVMYAKKFKQTWKGFSTHSFRYVFTNMRLALPSAAMVCLEYWAFEVLVFLAGLMPDSQITTSLIAICINTEFIAYMITYGLSAAASTRVSNELGAGNPERAKHAMSVTLKLSLLLGLCFVLALGFGHNIWIQFFSDSSTIKKEFASVTPLLAISILLDAIQGVLSGVSRGCGWQHLAAYINLATFYLIGLPISCFLGFKTNLQYKGLWIGLICGLLCQSGTLFLFIRRAKWTKLDLSRDNDKERPLVV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02441 491 CDD MATE_eukaryotic 44 476 IPR045069 GO:0042910|GO:1990961
Gma13g02441 491 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma13g02441 491 Pfam MatE 275 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma13g02441 491 MobiDBLite consensus disorder prediction 1 30 - -
Gma13g02441 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 485 - -
Gma13g02441 491 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma13g02441 491 PANTHER PROTEIN DETOXIFICATION 24 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02441 Gma-Chr13 39192373 39197050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02441 K03327 - gmx:100816310 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02441 13 39192373 39197050 Gma13g02441 13 39192373 39197050 ECH