Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02405 ATGGCATTGCGTCATTTACGAATCTTCCCTCACACACTTCCTCTAACTCTCACTCCCAAACCCAAACTCAATAACAGTAACCGTTTTTCGTTCTTCACTTCCTCACTCTCTCTCTCTTCCACCACACTCATGGCCACTGCTCACAAGGTCCTCGTTCCCATCGCCGACGGCACCGAGCCCATGGAGGCCGTCATCATCATCGACGTCCTCCGCCGCTCCGGCGCCGATGTCACCGTCGCTTCCTCCTCCGCCAACCTCGCCGTCCAAGCTCTCCACGGCGTCAAGATCATCGCCGACGCCTCCGTCTCCGACGTCGCCGCCACCGCCTTTGACCTCGTCGCTCTCCCCGGAGGTTTACAGGGTGATGAGAATCTGAGAGACTGTAAAGTTCTTGAAGGGTTGGTGAAGAAGCATGTTGAGGACGGACGGCTTTATGCGGCGGTGTGTGCTGCTCCTGCGGTAGTGCTTGGGCCTTGGGGTTTGCTGAATGGGAAAAAGGCGACTTGTTATCCTGCATTGATGGAGAAATTGGCCGCTTACGTAGCCGCTACTTCTGAGTCTAGGGTGCAGGTGGATGGCACAGTTGTGACCAGTCGTGCGCCGGGAACTACCATGGAGTTTGCCATTGCTCTGATTGAGCAGTTAATTGGGAAAGAGAAAGCGTATGAAGTTGCAGGTCCATTGGTCATGCGTTCCAATCATGATGATGAACATACTTTTAAGGAGTTCAACTCAGTGCAGTGGACATCTGACAATCCGCCCAAGATTCTTGTACCAATTGCCAATGGTTCAGAGGAAATGGAAGCTGTTATTATCATTGATATTCTGCGAAGAGCAAAGGCAAAGGTTGTGGTTGCATCTGTTGAAGATAAACTAGAGATTGTGGCATCGCGCAAAGTTAAACTGGAGGCAGACATGCTCCTTGATGAAGCAACCAAACTTTCATATGACCTTATTGTGTTACCTGGTGGACTTGGTGGTGCCCAAACTTTTGCAAACTCAGAAACCTTGGTGAGTTTGCTGAAAAAGCAAAGAGAATCAAACAAATATTACGGGGCAATTTGTGCATCCCCGGCTTTAGTTTTGGAGCCCCATGGCTTGCTGAAGGGCAAAAAGGCCACTGCCTTTCCTGTAATGTGCGACAAGTTATCAGATCAGAGTGAAGTAGAAAACAGGGTGGTGGTTGATGGCAATCTTATTACCAGCAGAGGCCCAGGAACTTCCATTGAGTTTGCGTTAGCGATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCACTAGAACTTGCAAATGCAGTAGTGTTCGCACGCCCTTAG 1314 0.5008 MALRHLRIFPHTLPLTLTPKPKLNNSNRFSFFTSSLSLSSTTLMATAHKVLVPIADGTEPMEAVIIIDVLRRSGADVTVASSSANLAVQALHGVKIIADASVSDVAATAFDLVALPGGLQGDENLRDCKVLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGKKATCYPALMEKLAAYVAATSESRVQVDGTVVTSRAPGTTMEFAIALIEQLIGKEKAYEVAGPLVMRSNHDDEHTFKEFNSVQWTSDNPPKILVPIANGSEEMEAVIIIDILRRAKAKVVVASVEDKLEIVASRKVKLEADMLLDEATKLSYDLIVLPGGLGGAQTFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKKATAFPVMCDKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELANAVVFARP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02405 437 Pfam DJ-1/PfpI family 255 417 IPR002818 -
Gma13g02405 437 Pfam DJ-1/PfpI family 48 214 IPR002818 -
Gma13g02405 437 SUPERFAMILY Class I glutamine amidotransferase-like 48 235 IPR029062 -
Gma13g02405 437 TIGRFAM not_thiJ: DJ-1 family protein 49 226 IPR006287 -
Gma13g02405 437 TIGRFAM not_thiJ: DJ-1 family protein 255 430 IPR006287 -
Gma13g02405 437 Gene3D - 42 244 IPR029062 -
Gma13g02405 437 Gene3D - 247 436 IPR029062 -
Gma13g02405 437 CDD GATase1_DJ-1 50 215 - -
Gma13g02405 437 SUPERFAMILY Class I glutamine amidotransferase-like 253 434 IPR029062 -
Gma13g02405 437 CDD GATase1_DJ-1 256 419 - -
Gma13g02405 437 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 45 432 - -
Gma13g02405 437 PANTHER BNAA06G01020D PROTEIN 45 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02405 Gma-Chr13 38810647 38814201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02405 K03152 - gmx:100807226 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02405 13 38810647 38814201 Gma13g02405 13 38810647 38814201 ECH