Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02398 ATGTCCCTCTCCACCGTGAGGCAGCGGCGCTCGGAGCCGTCTGATCCGTCGCCATCAGAACCGTACACGAAGCTGGACAAGCCCGAGAAAGCGGAGGAGAAAGACGAAGGGTTGGGGTGGGTTTTCCCGTTCGTGGCTCTTGGGTTATTGAGGTACATGAGTGCCACCTCCAACATCATCCACGATTGCGACGAGGTCTTCAATTACTGGGAGCCTCTTCATTTCCTTCTCTACAAATCTGGATTCCAGACATGGGAATACAGTTCACAGTTTGCTCTTCGGTCATATTTGTACCTTTTATTTCATGAAATAGTGGGTCGACCAGCTTCATGGTTGTTTAGTGAGGACAAAGTGAGAGTGTTCTATGCTGTGAGATTCTTTCTCGGTCTTCTCTCTGTTTTGACTGATACTGTTCTCGTGGTAGCTCTTTCGAGAAAGTATGGAAAACGACTTGCTACGTATGCCCTTGCTATGCTGTGCTTAACCAGTGGCTGTTTCTTTGCTAGCACTAGTTTCTTGCCGAGTTCGTTTTCTATGTATGCAATATCTCTTGCATCAGGTTTATTTCTTCTGGATAAACCTGCTGCAGCAATTTCTGTTGCTGTTATTGGTGTAATACTTGGCTGGCCATTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTATCTAGAAAATTCAAACAGGCATTTATTGCTGCGGCTGTCACATCAATTCTTCTTCTTGCATTGTCAATAGTTATGGACTTTTACTACTATGGAAAATGGACTTCATCTGTCTTGAATCTTTTAATATACAATGTAGCTGGAGGCGGTGAAAGCCATCTGTATGGGACTGAAGGGCCTCTTTATTATCTGAGGAATGGATTTAACAATTTCAACTTTTGTTTTGTTCTTGCTCTGCTGTTCTTGGGGATTTTGCCTATTGCAAAGAAGAAATATGCACCAGACCTACTGATTGTGATATCACCTATATATATTTGGCTGGGGTTTATGTCTTTGCAGCCACACAAAGAAGAAAGGTTCCTTTATCCAGTATATCCACTTATTTGTGTTGCTGCTTCAGCTGTTATTGAGAGCTTCCCTGATCTTTTCCGTAGCAAATATAATCCATATGATCGCTCTATAATAGTGACAGTTGCCAAAGTTATGAGACCAGTGGTTCTTAGCCTTATACTATATGCCTCTCATGCCCGTACATTTTCTCTGATCAATGGTTACTCCGCTCCCTTAGAGGTTTACAAGATCTTGGAACACCATGATGCAGAAAACAATTCTGTACTTTGTGTTGGAAGTGAATGGCATCGCTTTCCATCATCATTTTTCATCCCAGATTATGTGGGACAAGTTCGATGGATTGACGATGGATTCCGAGGTCTTCTTCCCATCCCATTTAATTCTACCCTAGGGGGGACTGCATCAGCACCACCATATTTCAACAATAAAAACATGGCATCAGACAAGCAATATCTCCATGATGTTGATGCTTGTACTTTCCTTGTCGAGCTGCAGCTAGAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGCCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCGGCACTGTATAGGTCCTTTTTCATTCCTTACCTTTGGCAAGAGAAGAATGTTTTTGGAATGTATAAGCTGCTTAAAAGAAGAACCACCTGA 1695 0.4313 MSLSTVRQRRSEPSDPSPSEPYTKLDKPEKAEEKDEGLGWVFPFVALGLLRYMSATSNIIHDCDEVFNYWEPLHFLLYKSGFQTWEYSSQFALRSYLYLLFHEIVGRPASWLFSEDKVRVFYAVRFFLGLLSVLTDTVLVVALSRKYGKRLATYALAMLCLTSGCFFASTSFLPSSFSMYAISLASGLFLLDKPAAAISVAVIGVILGWPFSILAFLPVTLYSLSRKFKQAFIAAAVTSILLLALSIVMDFYYYGKWTSSVLNLLIYNVAGGGESHLYGTEGPLYYLRNGFNNFNFCFVLALLFLGILPIAKKKYAPDLLIVISPIYIWLGFMSLQPHKEERFLYPVYPLICVAASAVIESFPDLFRSKYNPYDRSIIVTVAKVMRPVVLSLILYASHARTFSLINGYSAPLEVYKILEHHDAENNSVLCVGSEWHRFPSSFFIPDYVGQVRWIDDGFRGLLPIPFNSTLGGTASAPPYFNNKNMASDKQYLHDVDACTFLVELQLERPYLTRGSDLSTWEPIAALPYLDRELSPALYRSFFIPYLWQEKNVFGMYKLLKRRTT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02398 564 PANTHER GLYCOSYLTRANSFERASE 44 562 IPR005599 GO:0016757
Gma13g02398 564 MobiDBLite consensus disorder prediction 1 31 - -
Gma13g02398 564 Pfam Alg9-like mannosyltransferase family 44 445 IPR005599 GO:0016757
Gma13g02398 564 MobiDBLite consensus disorder prediction 1 18 - -
Gma13g02398 564 PANTHER ALPHA-1,2-MANNOSYLTRANSFERASE ALG9 44 562 IPR039484 GO:0000030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02398 Gma-Chr13 38731939 38737502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02398 1 561 Glycosyltransferase AT1G16900 73.239 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02398 K03846 - gmx:100805094 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02398 13 38731939 38737502 Gma13g02398 13 38731939 38737502 ECH