Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02392 ATGGATGATGCGCCAGGCAGGAAGCCTTGGAAAGCTTTCAGACCAGATGGAGTCATTATCTTCTCAGACATCCTTACACCACTTCCTGCATTTGGAGTTGATTTTGACATAGAAGAAGTAAGGGGACCTGTTATACATTCACCCATTCATTCTGAGGAAGGATTAAAGGTTTTGCATCCAATTGACCTGGACAGGCTTAAATTTGTTGGAGATTCACTTAAGATACTGCGCCGAGAGGTTGGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCTCCTTGGACAATAGCAACATATATAGTGGAAGGGGGTACAACACGCACATATACAACCATTAAGAGCATGTGTCACACTGCTCCACATGTATTGAGGACTTTGCTTTCTCATTTGACACAAGCAATAGCTGATTATGCTATTTTCCAAGTGGAGTCTGGGGCTCACTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGAAATGTGGGAATGCTGGTCAAAGTCATATATCAAAGAGATTGTAAATTTGGTCAAGAAAAAATGCCCTGAGGTACCAATTGTTCTTTATATAAATGGAAATGGTGGTCTTCTTGAGCGTATGAAAGACACTGGAGTTGATGTTATAGGGCTAGACTGGACAGTGGATATGGCAGATGGAAGAAGAAGATTGGGTAGTGGGATAAGTGTTCAGGGAAATGTGGACCCTGCCTACTTGTTCTCTCCTCTTGATGCCCTGACTGAAGAAATTCAGAGGGTTGTGAGGTGTGCGGGACCTAGACGGCACATCCTTAATCTCGGACATGGTGTTCTTGTTGGCACGCCTGAAGAAGCTGTTGCACATTTCTTTGAAGTAGCTAGGAGCTTGCAGTTTGAAACACTTTTTCAAAACAATACCGCAAAAGACCCTAATCTTGTAACTTAA 927 0.4315 MDDAPGRKPWKAFRPDGVIIFSDILTPLPAFGVDFDIEEVRGPVIHSPIHSEEGLKVLHPIDLDRLKFVGDSLKILRREVGGHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYAIFQVESGAHCIQIFDSWGGQLPPEMWECWSKSYIKEIVNLVKKKCPEVPIVLYINGNGGLLERMKDTGVDVIGLDWTVDMADGRRRLGSGISVQGNVDPAYLFSPLDALTEEIQRVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLQFETLFQNNTAKDPNLVT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02392 308 CDD URO-D 9 289 IPR006361 GO:0004853|GO:0006779
Gma13g02392 308 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 8 302 - -
Gma13g02392 308 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 87 103 IPR000257 GO:0004853|GO:0006779
Gma13g02392 308 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 8 302 - -
Gma13g02392 308 TIGRFAM hemE: uroporphyrinogen decarboxylase 8 288 IPR006361 GO:0004853|GO:0006779
Gma13g02392 308 SUPERFAMILY UROD/MetE-like 8 291 IPR038071 -
Gma13g02392 308 Gene3D - 6 292 IPR038071 -
Gma13g02392 308 Pfam Uroporphyrinogen decarboxylase (URO-D) 8 289 IPR000257 GO:0004853|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02392 Gma-Chr13 38669640 38673109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02392 K01599 - gmx:100803496 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02392 13 38669640 38673109 Gma13g02392 13 38669640 38673109 ECH