Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02379 ATGAGAAATCACATTTTCTTCTTATTCGTTCTCATTGCACTTGCCCCCACTTTCTCTCTCCACTTGCAATCTCACGCCGCTCCTGCAGGGCCGTTGATTAAGCATATTTCTTCACTCATCAAATGGACAAGGTCTACCTCCAAGACACCACACTCAGATGGGAATGTTCTTCAATTTGAAAATGGCTACGTGGTGGAGACTGTTGTGGAAGGAAACGAGATTGGGGTTGTCCCTTACAGGATCCGCGTCTCTGAGGAGGATGGTGAACTCTTTGCTGTTGATGCAATTAACAGCAACATTGTTCGGATAACTCCACCGCTGTCCCAATATAGTAGAGGAAGATTGGTGGCTGGGTCATTTCAGGGATACACTGGCCATGTGGATGGAAAACCAAGTGATGCTCGTTTCAATCATCCCAAAGGCATAACTGTGGATGATAAGGGGAATGTTTATGTTGCTGATACTCAGAATCTGGCCATCAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCAGGCTACAGGGATGGGCCTAGTGAGGATGCTAAATTCTCAAATGATTTCGATGTGGTATATGTTCGGCCCACCTGTTCCTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGACAAATCTCTCTTGACCAGGAGGACTGTGATTATCAGTCTAATTCAATTTCCAGTACAGATATACTTACAGTTGTTGGTGCTGTTATAGTAGGATATGCTACATGTATGCTTCAGCAGGGATTTGGATCCTCTTTTTTCTCAAAAACGcagcaaccatCACAAAAACAGTTCAAAGGGTTAGCAAGCAATGAGAAACACATGCCAATCCTGGAGAGCAGTAAAGAGGAGCCGGGATGGCCGTCTTTCGGACAGCTCATTGTTGATCTTTCTAAGCTTTCCCTTGAAGCATTAGCTAGCACATTCATTCAATTCATACCCTCACATTTCAGACCTAGCAACTCCAAGAGAGGCCTAACACCACTGAAAGATCGTCTTGTGATGCCTGAAGATGATGTGCGGCCTCCATTGGTCAACAGGCAAAATGCTCAAGGAcatactcctcttaccgaaaataggatggcatcacaggtccatactcctcttaccgaaaatcggatggcgtcacaggtccatactccAACCATAGCTGAGAAATATTCAGAAATGAAGCCCCCAAAGATAAAATCAAGCAGTTTCAAGGACCCCTCTATGTCAAGCAAGCACCGGTCGTCAAGACGACCTGAGTATGCTGAATTCTATGGTTCTTCTGAGATTCCTCCGTACACCAAATCTAAGAGCCAGAAAGAAAGGCCAAGACACAGACAACGAGAAAAGAGTGGAGAAGTCGTTATGGGGGCAGTTGGAGCTGAGGCTAAACCAGTTGAGACAAGGGCTGTTGATCATAATGATCCAAAGTTTGACCATTACAGTATGAGAACTAAGTATGCATCTGAGGAGACCTTCCGATTCAACTCTCAGTAA 1512 0.418 MRNHIFFLFVLIALAPTFSLHLQSHAAPAGPLIKHISSLIKWTRSTSKTPHSDGNVLQFENGYVVETVVEGNEIGVVPYRIRVSEEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLDQEDCDYQSNSISSTDILTVVGAVIVGYATCMLQQGFGSSFFSKTQQPSQKQFKGLASNEKHMPILESSKEEPGWPSFGQLIVDLSKLSLEALASTFIQFIPSHFRPSNSKRGLTPLKDRLVMPEDDVRPPLVNRQNAQGHTPLTENRMASQVHTPLTENRMASQVHTPTIAEKYSEMKPPKIKSSSFKDPSMSSKHRSSRRPEYAEFYGSSEIPPYTKSKSQKERPRHRQREKSGEVVMGAVGAEAKPVETRAVDHNDPKFDHYSMRTKYASEETFRFNSQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02379 503 PANTHER NHL DOMAIN-CONTAINING PROTEIN 14 500 - -
Gma13g02379 503 MobiDBLite consensus disorder prediction 356 370 - -
Gma13g02379 503 Gene3D - 37 221 IPR011042 -
Gma13g02379 503 MobiDBLite consensus disorder prediction 349 370 - -
Gma13g02379 503 MobiDBLite consensus disorder prediction 392 483 - -
Gma13g02379 503 PANTHER - 14 500 - -
Gma13g02379 503 Pfam NHL repeat 136 162 IPR001258 GO:0005515
Gma13g02379 503 SUPERFAMILY NHL repeat 60 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02379 Gma-Chr13 38558831 38563146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02379 - - gmx:100797841 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02379 13 38558831 38563146 Gma13g02379 13 38558831 38563146 ECH