Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02349 ATGGCTACGCATACGCCAAAAAATATCCTCATTACTGGAGCTGCTGGATTCATCGCATCTCATGTTGCGAATCGGCTTATCCGGAATTATCCCCAGTACAAAATTGTTGTTCTTGACAAGCTTGATTACTGTTCAAATCTGAAGAATCTCATTCCTTCAAAATCATCTCCTAACTTCAAGTTTGTGAAGGGGGATATTGGAAGTGCTGATCTTGTCAACTACCTTCTCATCACTGAGTCCATTGACACAATAATGCACTTTGCTGCTCAAACCCATGTTGACAACTCCTTTGGCAACAGCTTTGAGTTCACCAAGAACAACATTTATGGTACTCATGTCCTATTAGAAGCCTGCAAGGTAACTGGCCAGATCAAGAGGTTCATCCATGTGAGCACTGATGAGGTCTACGGAGAGACAGATGAAGATGCTGTTGTTGGAAACCATGAGGCTTCTCAGTTACTCCCCACGAATCCATACTCTGCAACAAAAGCTGGGGCAGAAATGCTTGTCATGGCATATGGCAGGTCGTATGGGTTACCTGTGATCACGACTCGTGGGAACAATGTTTATGGGCCCAATCAGTTCCCTGAGAAGTTAATTCCAAAGTTCATTCTCCTGGCTATGCAAGGCAAGCCTCTTCCAATCCACGGGGATGGTTCTAATGTGAGGAGTTATTTGTATTGTGAAGATGTTGCAGAAGCTTTTGAACTTATCCTTCACAAGGGAGAGGTCGGGCATGTTTACAATATTGGTACTAAGAAGGAAAGGAGGGTTATTGATGTTGCCAAAGATATGTGCAGGCTTTTTAAGATGGACCCAGAGACTAGTATAAAATTTGTGGAGAACAGACCATTTAATGACCAGAGATACTTTCTTGATGATGAAAAGCTTAAGATCTTGGGTTGGTCTGAGAGGACCACTTGGGAAGAGGGCTTGAAGAAAACCATGGACTGGTATATCAACAATCCTGATTGGTGGGGTGATGTCAGTGGTGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCTGGTGGATTGGAGAGACATTTTGATGGATCTGATGAAGAAAAACCTGCATCATATGTCTCAACTAATACTCGAATGGTGGTTCCAACATCCAAGAATGTTAACTCCTCTCAGAAACCTGCTCTCAAGTTCTTGATCTATGGCAGAACAGGTTGGATTGGGGGTTTGCTGGGGAAGTTGTGTGAAAAGCAAGGAATTCCCTATGAATATGGAAAAGGACGCCTGGAGGACCGATCATCACTTGTGGCTGATATTCAGAATGTGAAGCCAACACACATTTTTAATGCAGCTGGAGTAACTGGCAGACCCAATGTCGATTGGTGTGAATCTCATAAGACGGAAACCATTCGCACCAACGTTGCTGGGACTTTAACATTGGCTGATGTCAGCAGAGAGCATGGACTCTTGATGATAAATTATGCTACTGGGTGCATATTTGAGTATGATGCAGCTCATCCAGAGGGTTCTGGCATTGGCTTTAAGGAGGAAGACAGACCCAACTTCTTTGGTTCTTTCTATTCCAAAACTAAGGCTATGGTTGAGGAGCTCTTAAAAGAATATGACAATGTGTGCACCCTCAGGGTTCGCATGCCAATTTCATCTGACTTGAGCAATCCACGCAATTTCATCACCAAGATTTCTCGTTATAACAAAGTGGTCAACATTCCAAACAGCATGACCATTTTGGATGAACTTCTGCCTATTTCAATTGAGATGGCAAAGCGAAACTTGAGGGGCATCTGGAACTTCACAAATCCTGGGGCCGTGAGCCACAATGAGATTCTTGAGATGTACAGGGATTACATCGATCCAAGCTTCAAGTGGGCTAACTTCAATCTTGAAGAGCAAGCCAAGGTGATAATTGCTGCACGGAGCAACAACGAGATGGATGCATCCAAACTGAAGAACGAGTTCCCTGAGCTTCTTTCCATCAAGGAATCACTGATCAAGTTAGGATGGAATTTCTGA 1995 0.4366 MATHTPKNILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLIPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFELILHKGEVGHVYNIGTKKERRVIDVAKDMCRLFKMDPETSIKFVENRPFNDQRYFLDDEKLKILGWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGLERHFDGSDEEKPASYVSTNTRMVVPTSKNVNSSQKPALKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVSREHGLLMINYATGCIFEYDAAHPEGSGIGFKEEDRPNFFGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPSFKWANFNLEEQAKVIIAARSNNEMDASKLKNEFPELLSIKESLIKLGWNF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02349 664 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Gma13g02349 664 Gene3D - 373 661 - -
Gma13g02349 664 Gene3D - 200 322 - -
Gma13g02349 664 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 377 645 IPR036291 -
Gma13g02349 664 Pfam RmlD substrate binding domain 385 555 IPR029903 -
Gma13g02349 664 Gene3D - 9 313 - -
Gma13g02349 664 PANTHER BNAC05G13120D PROTEIN 2 661 - -
Gma13g02349 664 CDD dTDP_HR_like_SDR_e 385 657 - -
Gma13g02349 664 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
Gma13g02349 664 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 332 IPR036291 -
Gma13g02349 664 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 2 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02349 Gma-Chr13 38225147 38228601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02349 8 320 Miscellaneous Gene Families AT4G00110 27.164 6.32e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02349 K12450 - gmx:100789909 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02349 13 38225147 38228601 Gma13g02349 13 38225147 38228601 ECH